Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2293 ATGTTGATAGTCATGATTTTTTTTAAATTTTTGAGCTTTTCAATGATCAGAAGATTGGCAAGTTACGGCATCGGAGAAAGAACTCCATTGAAATTGACAACAGCAAACTTCAAAATGAGTTTGATAATGACTGGTATTCCACCTATTGAAGTCACAGATGCCCATTCAAACCTTGACACGCATCATTCGCCTTCTACTTCACAACAAGCAGAGGATGCTGCACATAATCATCAAATTATGAGGGAGGAATGGGCTGCGACATACATTCAAACAGCATTTCGAGGATTTTTGGCCAGAAGAGCACTAAGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCTCTTGTGAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTTCGTTTGTCATTGGAAAGTGAAACAGCTCAACAGAAACTTCAGCAACAGCTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGTTGGTGTGACAGTGTGGGATCTGTTGAAGAAATTCAAGCCAAAATATTAAAGAGACAGGAAGCTGCAGCCAAACGAGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAAGCAGGATCACGGCAGCAGGCTGTTTCTTCTGGGTTTGAACCTGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAACGATGGATGGCTGTGCGTCCTTGGGAGAATCGCTTTCTTGACAGTAATTCGAGGGATGGGTTAAGATCTGCTAACACAAGGCCAATTCCATCAAACATTCATGCAAACCTTGCCAGTCAGAAAACTGGTCCCTCTCTTTCCGATGGCTGTGATTCTTCACCTAGTAAGTCAGCAGGTTTGCTAGAATCATCAAACACAACATCTGTTAGGCCGAAGTCTAATGCAAATGCTCAAAATCCAACCGAAGAAGCCAACTCAAAACCTGAAATTCCGTCAAGATCTCATAGTAACCCAAAGGAGAGAACCACAAAGGTAGATAAGCAGGCAAACAAGCGATTATCTCTTCCTAACAATGCAGGGGGAGGTCCCAGGGCTCAAACAGCCAGAGATCCTACTAGAACTAATGCAAAAGGGACACATGGCACTCAAAAGCCTATAAGGGATAAAGCTAAGCTCTTTGGAGGAGGGGATGTGAATCTTAATAAACCTGTTCCACAGCCCTCAGTTATGTAG 1227 0.4393 MLIVMIFFKFLSFSMIRRLASYGIGERTPLKLTTANFKMSLIMTGIPPIEVTDAHSNLDTHHSPSTSQQAEDAAHNHQIMREEWAATYIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLSLESETAQQKLQQQLANEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRQQAVSSGFEPDKSSWGWNWLERWMAVRPWENRFLDSNSRDGLRSANTRPIPSNIHANLASQKTGPSLSDGCDSSPSKSAGLLESSNTTSVRPKSNANAQNPTEEANSKPEIPSRSHSNPKERTTKVDKQANKRLSLPNNAGGGPRAQTARDPTRTNAKGTHGTQKPIRDKAKLFGGGDVNLNKPVPQPSVM* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2293 408 MobiDBLite consensus disorder prediction 58 74 - -
Dod03g2293 408 SMART iq_5 81 103 IPR000048 GO:0005515
Dod03g2293 408 SMART iq_5 104 125 IPR000048 GO:0005515
Dod03g2293 408 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Dod03g2293 408 Gene3D - 83 124 - -
Dod03g2293 408 MobiDBLite consensus disorder prediction 331 346 - -
Dod03g2293 408 Pfam IQ calmodulin-binding motif 84 103 IPR000048 GO:0005515
Dod03g2293 408 MobiDBLite consensus disorder prediction 255 330 - -
Dod03g2293 408 PANTHER IQ-DOMAIN 5-RELATED 57 359 - -
Dod03g2293 408 MobiDBLite consensus disorder prediction 53 74 - -
Dod03g2293 408 MobiDBLite consensus disorder prediction 254 408 - -
Dod03g2293 408 PANTHER IQ-DOMAIN 5-RELATED 57 359 - -
Dod03g2293 408 ProSiteProfiles IQ motif profile. 82 110 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2293 Dod-Chr3 53385104 53388969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2293 34 357 IQD Protein Family AT3G22190 57.849 6.04e-106 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2293 - - lang:109325503 473.011