Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2286 ATGTCAATGGACATGATGGCAACCGAACGCGTTTGTTATGTTCACTGCAACTTCTGCAACACCGTTCTAGCGGTTAGTGTTCCATACATCAGTTTGCTGACCATAGTGACGGTTAGATGTGGGCATTGTGCCAATTTGCTGTCAGTGAACACGGGAGCATCACTTCAACCATTTCCTCCTCAAGACCCTCAGAAACAGCACCCAAGCTTTGAAGAATCAAGCAGCAAAGAACCGGGATCATCTTCAAAATGCAACAAAATTGCGGCATTTGAGCCCATAGAGCATGAACAATCTAGGATTCCTCCAATTCGTCCTCCTGAAAAGAGACAACGTGTTCCTTCTGCCTATAACCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCCAGTAATCCAGATATCAGCCACAGGGAGGCTTTCAGCACAGCTGCCAAAAACTGGGCACATTTCCCTCATATTCACTTTGGATTAAAGCTGGATGGCAATAAGCAAGCGAAGTCGTTGGATCAAGCGGAAGAAGCACAAAAGTCTAATGGATTCTACTAA 546 0.4505 MSMDMMATERVCYVHCNFCNTVLAVSVPYISLLTIVTVRCGHCANLLSVNTGASLQPFPPQDPQKQHPSFEESSSKEPGSSSKCNKIAAFEPIEHEQSRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKSLDQAEEAQKSNGFY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2286 181 MobiDBLite consensus disorder prediction 57 86 - -
Dod03g2286 181 Gene3D High mobility group box domain 102 178 IPR036910 -
Dod03g2286 181 SUPERFAMILY HMG-box 101 151 IPR036910 -
Dod03g2286 181 PANTHER PROTEIN YABBY 6-RELATED 1 181 IPR006780 GO:0007275
Dod03g2286 181 Pfam YABBY protein 7 157 IPR006780 GO:0007275
Dod03g2286 181 PANTHER PLANT-SPECIFIC TRANSCRIPTION FACTOR YABBY FAMILY PROTEIN 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2286 Dod-Chr3 53281212 53289641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2286 1 181 C2C2-YABBY Transcription Factor Family AT1G08465 66.845 1.34e-84 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dod03g2286 YABBY 2e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2286 K25796 - gmx:100500091 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1408 10 34372510 34384785 Dod03g2286 03 53281212 53289641 PCT