Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2281 ATGTTTAACGGAATGATGGATCCTGAGTTGATCAGAATCGCCCAGGAACAGATGAGTCGCATGTCACCCGCTGAGTTGGCTCGGATCCAACAACAGATGATGTCTAATCCTGATCTGATGAGGATGGCATCGGAGAGCATGAAGAACATGAGTACCGAAGACTTTAAACTTGCTGCAGAACAGTTGAAGCATACACGTCCGGAAGAGATGGCTGAGATCGGTGAGAAGATGGCTAATGCATCGCCTGATGAAGTGGCAGCCATGCGCACCCATGTTGATGCCCAGATCAAATATCAATTAAATGCAGCTGAGATGTTGAAGAAGCAGGGAAATGAACTTCATAATAAGGGAATGTTCAATGATGCTTTGCAAAAATATCTGCGTGCTAAGGAAAACATCAAAGAGATTCCACCTTTTCAAAGTAGAAAACTTCTTCAGGCATGCTCACTCAACTTGATGTCCTGCTACCTGAAGACGAAGCAGTATGATGAATGTATAAAAGAAGGTTCTGAGGTTTTGGCATATGATGCTAAGAATCTTAAGGCTTTTTATCGAAGAGGTCAAGCATATAAAGAACTAGGCCTACTAAAGGATGCCGTTACTGATTTGAGCAAAGCACTTGAACTGTCCCCTGATGATGATATAGTTGCAGAGCTTTTACGGGACACGAAAGAAATGTTGGCAAAGGAAGGTGATGAGCATGCACCCAGAAGATTAGTAATTGAAGAAATAACTGAAGAAGTTGAGAAAGTTCCTTCTGGAAACAATAAAAGCTCTTCTTCAGAACAACCCGTGGTTCAACCAAGAAAGTCTGGTGACTCTTCTAGTAGTTTCAGTGCTATTAACGATGGTTATCCAAAAACAAACTCAGAGAGTTTAGATAAATTGAAAAATGACCCCATGGCTATGAGATCATTCCAAGACTTCATTTCAAAAGCTGATCCTGCCACTCTGGCTTCTTTGAATGGTGGACCATCCAATGACGTGTCTCCTGATATGATTAAAACTGCCTCAAATATGATTAGCAAGATGTCTCCTCAGGAACTTCAAAAAATGCTTGAAATGTCTTCTGCATTTCAAGGGGACAACCCAATGTTCAGGGGTGGTTCCCCTGATTCCCCTTTCAACCCTGGATCAATGCCCCCCAATGTAACACCTGAAATGTTTAAAACTGCGAGTGATATGATGCGCAAAATGTCACCAGATGACCTTCAGAAAATGTTCGAAATGGCATCTTCATTTAAAGGGAAAGAATCTATTCCATCATCAGCACCTGTGGACAACAATGAAAGAAATTCTTCCCAGTCAAACTTCCCATCCTCAAGTACTAATGAAACTAATGTATCCGGAGAATCAAGTTCTTCTCACAATGCATTTTCAAATATGAGAAATATTTCTCAGGAAAACTTCCCTTCCTCAAGCACTGATTTGCAAGAACAGATGAGAAACCAAATGAAAGATCCAGCTATGCGGCAGATGTTCACATCAATGATTAAAAATATGAGCCCTGAAATGATGTCAAACATGGGTGAACAATTTGGTTTCAAGCTTTCACCTGAGGAGGCAGCAAGAGCTCAGCAAGCCATGTCATCCTTATCACCAGAGAGCTTAGATAAAATGATGCTTTGGGCAGACAGGCTCCAAAGAGGAGTTGAAGGTGCAAGAAAGACAAAGAACTGGCTGCTAGGGAAGCCTGGCATGGTCTTGGCAATATGCATGCTCATTTTGGCTATCATTCTTCACCGGTTGGGCTTCATTGGTGGCTAG 1767 0.4194 MFNGMMDPELIRIAQEQMSRMSPAELARIQQQMMSNPDLMRMASESMKNMSTEDFKLAAEQLKHTRPEEMAEIGEKMANASPDEVAAMRTHVDAQIKYQLNAAEMLKKQGNELHNKGMFNDALQKYLRAKENIKEIPPFQSRKLLQACSLNLMSCYLKTKQYDECIKEGSEVLAYDAKNLKAFYRRGQAYKELGLLKDAVTDLSKALELSPDDDIVAELLRDTKEMLAKEGDEHAPRRLVIEEITEEVEKVPSGNNKSSSSEQPVVQPRKSGDSSSSFSAINDGYPKTNSESLDKLKNDPMAMRSFQDFISKADPATLASLNGGPSNDVSPDMIKTASNMISKMSPQELQKMLEMSSAFQGDNPMFRGGSPDSPFNPGSMPPNVTPEMFKTASDMMRKMSPDDLQKMFEMASSFKGKESIPSSAPVDNNERNSSQSNFPSSSTNETNVSGESSSSHNAFSNMRNISQENFPSSSTDLQEQMRNQMKDPAMRQMFTSMIKNMSPEMMSNMGEQFGFKLSPEEAARAQQAMSSLSPESLDKMMLWADRLQRGVEGARKTKNWLLGKPGMVLAICMLILAIILHRLGFIGG* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2281 588 Gene3D Tetratricopeptide repeat domain 89 235 IPR011990 GO:0005515
Dod03g2281 588 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 59 587 - -
Dod03g2281 588 SUPERFAMILY TPR-like 95 226 IPR011990 GO:0005515
Dod03g2281 588 MobiDBLite consensus disorder prediction 416 458 - -
Dod03g2281 588 Pfam Tetratricopeptide repeat 181 213 IPR001440 GO:0005515
Dod03g2281 588 MobiDBLite consensus disorder prediction 414 458 - -
Dod03g2281 588 MobiDBLite consensus disorder prediction 251 289 - -
Dod03g2281 588 ProSiteProfiles TPR repeat region circular profile. 180 213 - -
Dod03g2281 588 SMART tpr_5 103 136 IPR019734 GO:0005515
Dod03g2281 588 SMART tpr_5 146 179 IPR019734 GO:0005515
Dod03g2281 588 SMART tpr_5 180 213 IPR019734 GO:0005515
Dod03g2281 588 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Dod03g2281 588 PANTHER OUTER ENVELOPE PROTEIN 61 59 587 - -
Dod03g2281 588 MobiDBLite consensus disorder prediction 249 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2281 Dod-Chr3 53179054 53183851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2281 99 213 Calmodulin-binding Proteins AT5G48570 38.017 1.86e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2281 - - gmx:100793234 916.761