Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2270 ATGGCCAGAGGGGGTGGACTCTCCATGGATTCAGATCCAATTGGGAGCTTCTTCCATCACAAGCCAATTGTTCTCAACTCTTTCCCTGAAGACAACACAAACACCAACCACCCCAAGTGGAAACCAAGTCCCACAAACAACAACAACAACAATAACATGGATACCACAGTTAGCACTAAGAGGCCTTCTTCTCCCACACGCGGTGGCAGCAACATGCTCCCTTTCCAAGTCAACCTTAGCTGTTCCAACGACAACAGCCATGCTTCTCATGACACCAAAAGAGAAGAGGTGGACTTCTTCACCCACAACAACAACAACAACAATAACAAAGATGACAATGTTGCCTCTTCCTCTGCCTCCATCCCCGACAATGATCATTTCACCACTCCACCCATGTTGGAATTCAAAGTAAACACTGGTCTGAATCTTCTTACTACCAACACCAGCAGTGAGCAATCCATGGTGAAGGATGACATGTCACAAAATTCATCAGAAGACAGAAGAACTAAAAATGAGCTGGCTGTTCTTCAAGCCGAGCTTGAGCGAATGAAGGTGGAGAATCATCGGTTGAGGGATATGCTTGATGAGGTTAACACAAACTACAGTGCCCTGCAGATGCATATAATGAATCTGATGCAGGACCAAAAGGCCGAGGAAGGTGAAGAACAAGAAGCTGCATTTGATGGAAAACTAGAAGAGAAGAACAACAAGAACAAGAAGAAGCAAGGTGAGAGTGCATTGGTGCCAAGGCAATTCATGGATCTTGGTTTGGCTACAAATGCTGAGGCCGATGAAGAACCGTCTTCCCAATCAATGGGAAGAAGCCATCAAGACCGATCAGGATCACCAGGGAATAATAACTTAGAGGTGGCTTCAAAGGAATTAGGCACAGTTAAGTATGGCAATAATAATGCAAATGATGGTGAAGGACTTGTTTCTGATCAAGAGAAGAATAAGGAGTCTGGTAGGGGAATTGAGAGAGAAGATAGCCCCCAAGATCAAGCTTATGCTGCTAATAAAATCCAGAGGTTTAGTCCTCCAAAAAATGTTGACCAAGCCGAGGCCACTATGAGGAAAGCAAGAGTTTCTGTAAGAGCTCGATCAGAGGCACCTGTGATCAGTGATGGGTGTCAATGGCGAAAGTATGGACAGAAGATGGCTAAAGGAAACCCATGTCCTCGAGCTTATTACCGGTGCACTATGGCTTCTGGTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAGGACCAAACAGTCCTTGTCACAACATATGAAGGGAATCACAACCACCCTTTGCCTCCAGCTGCCATGGCAATGGCACAAACCACTTCCTCAGCTGCAAGAATGCTCCTCTCAGGATCAATGTCAAGCACTGATGGCCTCATGAATGCAAACCTCCTAGCAAGCACACTCCTCCCTAGCTCTTCAAGCATGGCAACTATATCAGCATCTGCTCCATTCCCAACTGTTACACTGGACCTAACTCAGTCCCCAGCTAACCCTCTGCAGTTCCCAAGGCCACCAAGCCAGTTCCAAATACCCTTCCCAGCTGCAGGTGCCAGCTCAACAGCATCATTGATGCCTCAGATATTTGGTCAGGCACTTTACAACCAGTCAAAGTTTTCTGGCCTCCAAATGTCCCAAGATTCAGACCCTTCACAAATGGGTGGTGGTAATAATAATAGTCACTCTCAGCAACAGGCACAGCCACACCTTGCTGACACAGTTGGTGCTGCCATAGCATCTGATCCAAACTTCGCTGCTGCTTTGTTAGCAGCTATCACTTCCATTATTGGTGGTGCTCAACAAAACAACAACAACAACAACAGTAGTACTCATAACAATACTGGCAACATGGGAGGTAGCAACAGCAATGGCAATGCCACAGTGAGCAACAGCAATAGCAATGGAAAGCAAGAAAACCAGCAATTCCAAAGTCTCAGGGAATAA 1953 0.4613 MARGGGLSMDSDPIGSFFHHKPIVLNSFPEDNTNTNHPKWKPSPTNNNNNNNMDTTVSTKRPSSPTRGGSNMLPFQVNLSCSNDNSHASHDTKREEVDFFTHNNNNNNNKDDNVASSSASIPDNDHFTTPPMLEFKVNTGLNLLTTNTSSEQSMVKDDMSQNSSEDRRTKNELAVLQAELERMKVENHRLRDMLDEVNTNYSALQMHIMNLMQDQKAEEGEEQEAAFDGKLEEKNNKNKKKQGESALVPRQFMDLGLATNAEADEEPSSQSMGRSHQDRSGSPGNNNLEVASKELGTVKYGNNNANDGEGLVSDQEKNKESGRGIEREDSPQDQAYAANKIQRFSPPKNVDQAEATMRKARVSVRARSEAPVISDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDQTVLVTTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSTDGLMNANLLASTLLPSSSSMATISASAPFPTVTLDLTQSPANPLQFPRPPSQFQIPFPAAGASSTASLMPQIFGQALYNQSKFSGLQMSQDSDPSQMGGGNNNSHSQQQAQPHLADTVGAAIASDPNFAAALLAAITSIIGGAQQNNNNNNSSTHNNTGNMGGSNSNGNATVSNSNSNGKQENQQFQSLRE* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2270 650 MobiDBLite consensus disorder prediction 28 86 - -
Dod03g2270 650 SUPERFAMILY WRKY DNA-binding domain 366 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g2270 650 SMART WRKY_cls 373 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g2270 650 MobiDBLite consensus disorder prediction 312 330 - -
Dod03g2270 650 MobiDBLite consensus disorder prediction 28 125 - -
Dod03g2270 650 MobiDBLite consensus disorder prediction 101 125 - -
Dod03g2270 650 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 84 620 IPR044810 GO:0003700
Dod03g2270 650 MobiDBLite consensus disorder prediction 215 244 - -
Dod03g2270 650 Pfam WRKY DNA -binding domain 375 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g2270 650 MobiDBLite consensus disorder prediction 262 332 - -
Dod03g2270 650 MobiDBLite consensus disorder prediction 263 311 - -
Dod03g2270 650 ProSiteProfiles WRKY domain profile. 368 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g2270 650 PANTHER OS05G0567200 PROTEIN 84 620 - -
Dod03g2270 650 Coils Coil 166 200 - -
Dod03g2270 650 Gene3D WRKY domain 358 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g2270 650 MobiDBLite consensus disorder prediction 605 650 - -
Dod03g2270 650 MobiDBLite consensus disorder prediction 215 250 - -
Dod03g2270 650 MobiDBLite consensus disorder prediction 146 170 - -
Dod03g2270 650 MobiDBLite consensus disorder prediction 544 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2270 Dod-Chr3 53048635 53052137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2270 75 610 WRKY Transcription Factor Family AT1G62300 46.303 4.22e-129 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod03g2270 WRKY 3.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2270 - - gmx:100127384 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2270 03 53048635 53052137 Dod03g2270 03 53048635 53052137 ECH
Dod03g2270 03 53048635 53052137 Dod03g0870 03 10739177 10742020 ECH
Dod10g1394 10 34203295 34206195 Dod03g2270 03 53048635 53052137 PCT