Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2269 ATGGCGTGGAGTAGAGGCCACACCATAGGCCATGGCTCATCAGCCACCGTCTCCCTCGCCACCCGGCGCAGTGGCGGCATCTTCGCGGTGAAGTCATCGGAGCTAGCTAAATCAGAGGCTTTACAAAGAGAGCAGAGAATTATGTCTTCTCTATGCTCTCCTTATATAGTTACCTATAAAGGGTGTGACACTACCATAGAGAACAAGAAGCTCTACTACAACCTCTTCATGGAGTACATGCCCTTTGGCACTCTTGTTCAAGAGACTCGCCGGAACGGTGGCCGGCTCGATGAGCCCGCCATAGCAGGCTACACAAGGCAAGTTGTGCAGGGGCTAGAGTACCTGCACTCAAAAGGGTTGGTGCATTGTGACATAAAGGGTGCCAACATCTTAATTGGTGAGGATGGTGCCAAAATCGGTGACTTTGGATGTGCAAAAAGTGTCGCCGATGCTGACACTGCAGCACTGATTGGCGGCACGCCGATGTTTATGGCGCCAGAGGTGGCGCGTGGGGAGGAACAAGGGTGTCCTAGTGATGTTTGGTCACTTGGTTGCACTTTGATTGAAATGGCCAATGGTGATGCAGCACCATGGCCTAATGTGGGAGACCCTTTTTCAGTTCTTTACCATATTGCATATTCTGGTGAAGTCCCAGAGATTCCATGTCTTCTATCTGATGAAGCAAAGGATTTCTTGCGGAAGTGTCTTATGAGGAATCCGCAAGAGAGGTGGACGGCTAGTCAACTTCTGAAGCATCCGTTTCTTGGGCAATTCAGTTCAAAGGCTAAGGAAATGAAGGAATCTAATTCAAGTTCCCCAACAAGTATTCTTGAGCAGGGATATTGGAGTTCTGTGGAAGAAGAATCAGGAAGCCTTGGCAATTTAGTTCACACAAGTTTTGAAAATTCACATGTTGCCAGGGTCAAAGGGTTAGCTATGTGTTCGGGGGAGCCCTGTTGGGCATGGCATGATGATGATGATGATGATGATGAGAATTGGATCACAATTAGAGGGAAAGAGTCAGGGGCTGAGGTTGGAGGCTTTTCGAAACTGTGGGTCAGGGATAGCTTCAACTAG 1077 0.4875 MAWSRGHTIGHGSSATVSLATRRSGGIFAVKSSELAKSEALQREQRIMSSLCSPYIVTYKGCDTTIENKKLYYNLFMEYMPFGTLVQETRRNGGRLDEPAIAGYTRQVVQGLEYLHSKGLVHCDIKGANILIGEDGAKIGDFGCAKSVADADTAALIGGTPMFMAPEVARGEEQGCPSDVWSLGCTLIEMANGDAAPWPNVGDPFSVLYHIAYSGEVPEIPCLLSDEAKDFLRKCLMRNPQERWTASQLLKHPFLGQFSSKAKEMKESNSSSPTSILEQGYWSSVEEESGSLGNLVHTSFENSHVARVKGLAMCSGEPCWAWHDDDDDDDENWITIRGKESGAEVGGFSKLWVRDSFN* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2269 358 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2269 358 PANTHER MAP KINASE KINASE KINASE 1 347 - -
Dod03g2269 358 SUPERFAMILY Protein kinase-like (PK-like) 4 285 IPR011009 -
Dod03g2269 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Dod03g2269 358 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 347 - -
Dod03g2269 358 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2269 358 Gene3D Transferase(Phosphotransferase) domain 1 2 312 - -
Dod03g2269 358 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Dod03g2269 358 PRINTS Tyrosine kinase catalytic domain signature 114 132 IPR001245 GO:0004672|GO:0006468
Dod03g2269 358 PRINTS Tyrosine kinase catalytic domain signature 77 90 IPR001245 GO:0004672|GO:0006468
Dod03g2269 358 PRINTS Tyrosine kinase catalytic domain signature 178 200 IPR001245 GO:0004672|GO:0006468
Dod03g2269 358 PRINTS Tyrosine kinase catalytic domain signature 224 246 IPR001245 GO:0004672|GO:0006468
Dod03g2269 358 Pfam Protein kinase domain 5 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2269 358 CDD STKc_MAPKKK 3 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2269 Dod-Chr3 53034878 53036199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2269 1 337 MAP Kinase Kinase Kinase AT1G05100 48.415 1.80e-106 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod03g2269 Pkinase 5.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2269 K20716 - gmx:100794648 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2269 03 53034878 53036199 Dod03g2269 03 53034878 53036199 ECH
Dod10g1393 10 34182694 34184045 Dod03g2269 03 53034878 53036199 PCT