Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2259 ATGTCGAGAGTGAGCAACAACATCAGTGACAATGAAGCTGTATCAAAAGAGGAAAGTCAAGAACGTAGAGGAAGAATGAAGAAAGGACCATGGACGCTTTCTGAAGACATTATGTTGAGAGGGTATGTGATGAAGTATGGTGAAGGGAATTGGAACTCTGTGCAAAAGAATTCTGAGTTAGCAAGGTGTGGCAAAAGTTGTAGACTCAGATGGGCTAACCATTTAAGGCCAAACTTGAAGAAAGGTACATTTTCTAAAGAGGAAGAACATATTATCATCCAACTCCACGCTAAGCTTGGAAACAAATGGGCTCGAATGGCCGCACAGTTACCTGGGAGAACAGATAATGAAATAAAGAACTTTTGGAATACTAGAGTGAAAAGATGTCAAAGAGCTGGGTTACCTCTATATCCTCAAGAAGTCCTGCGTGAAGCCAATTTATGCCATCTACAGCAACAATATCCCACACAACACTACACTCCATCATCTTTCTCATTTTCCTCTCTCTTATCTTCACCTATTTGTCAGAAACTCAATGAGCTAAGCTACCCTTCTACAAATATTAAGCAAAACCAACCTGATTCCTTTTATTACTCTAATCCACCATACTCACAATTCAAGTTTCCAAATAAGACTAGTTCAAATGGAAATATGAATTTGCCGTTATCCCCTATTTCGCCATATGTGTCATCTTCCTCCTCCTTGTTCAACCAGAGTTTTTATGCAAATAATTCACAGGATTATCATGCTGGGAACTACAACAATGACTTCCATTCTAATGCTGCTATTCCAAGTTCTCCATATGAGTCTCTTCCATTGTTGCAAAGCTCAAATACTGAGGCATCATCATTAAGTCAATCACCGCCTAGCTCAACAACCCCTACTTCATCTTATGCTAGTGGCTTGTTGGATGCACTTGTGGCAAAAGCCCAAAATCTTTGTCATAATGACAATTCAAAGGCTGAGGATTCAACTACATCAAAGGAGTTATCTCATAAGAGGAAAAGCACAGGAATTGAAGGAAGTTTAGAGAAGGAAGACATTGTGCTTGTGGAGTCAGCTAACAAAAATTATGGAAACACTAATAATAAAATACAAAGGGTTGATTCAAACTCATTTCAATTTTCAGCAGGGAATACACAAATTGTTCAGGGTGGATTGGAGGGGATAAATTCCATCGATGATGATATATTTGGACTACTCAACAATTTTCAAGAAATGCCAGTTCTAGGCTGGCATCACAGAGAAGGAGAACCACTGGGACTCGAAACTCAACAAGATGCTTCATTAGGCCCTACTAATTAA 1305 0.3908 MSRVSNNISDNEAVSKEESQERRGRMKKGPWTLSEDIMLRGYVMKYGEGNWNSVQKNSELARCGKSCRLRWANHLRPNLKKGTFSKEEEHIIIQLHAKLGNKWARMAAQLPGRTDNEIKNFWNTRVKRCQRAGLPLYPQEVLREANLCHLQQQYPTQHYTPSSFSFSSLLSSPICQKLNELSYPSTNIKQNQPDSFYYSNPPYSQFKFPNKTSSNGNMNLPLSPISPYVSSSSSLFNQSFYANNSQDYHAGNYNNDFHSNAAIPSSPYESLPLLQSSNTEASSLSQSPPSSTTPTSSYASGLLDALVAKAQNLCHNDNSKAEDSTTSKELSHKRKSTGIEGSLEKEDIVLVESANKNYGNTNNKIQRVDSNSFQFSAGNTQIVQGGLEGINSIDDDIFGLLNNFQEMPVLGWHHREGEPLGLETQQDASLGPTN* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2259 434 MobiDBLite consensus disorder prediction 14 29 - -
Dod03g2259 434 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Dod03g2259 434 Pfam Myb-like DNA-binding domain 81 124 IPR001005 -
Dod03g2259 434 SMART sant 27 77 IPR001005 -
Dod03g2259 434 SMART sant 80 128 IPR001005 -
Dod03g2259 434 MobiDBLite consensus disorder prediction 268 298 - -
Dod03g2259 434 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Dod03g2259 434 MobiDBLite consensus disorder prediction 317 338 - -
Dod03g2259 434 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 75 IPR017930 -
Dod03g2259 434 Gene3D - 83 129 - -
Dod03g2259 434 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Dod03g2259 434 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
Dod03g2259 434 MobiDBLite consensus disorder prediction 321 338 - -
Dod03g2259 434 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 16 413 - -
Dod03g2259 434 CDD SANT 83 124 IPR001005 -
Dod03g2259 434 Gene3D - 27 80 - -
Dod03g2259 434 CDD SANT 30 75 IPR001005 -
Dod03g2259 434 MobiDBLite consensus disorder prediction 1 29 - -
Dod03g2259 434 SUPERFAMILY Homeodomain-like 25 122 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2259 Dod-Chr3 52925162 52927276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2259 26 177 MYB Transcription Factor Family AT4G26930 65.409 2.70e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod03g2259 Myb_DNA-binding 2.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2259 K09422 - gmx:100784779 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2259 03 52925162 52927276 Dod03g2259 03 52925162 52927276 ECH