Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2232 ATGGCTGACGTGGATCGCTCCTCTGCTGATGTTTCTCCAGATTCTACAGAGCAAACCAATCAAGCCTCCAAGGTTGAATTTTCTGAAGAAGAGGAAATCCTTATTACCATGGTATACAATCTGGTTGGGGAGAGGTGGTCTTTGATTGCCGGAAGAATTCCCGGGAGAACAGCAGAGGAAATCGAGAAGTATTGGACTACAAGATTCTCAACCAGTGAATAA 222 0.4459 MADVDRSSADVSPDSTEQTNQASKVEFSEEEEILITMVYNLVGERWSLIAGRIPGRTAEEIEKYWTTRFSTSE* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2232 73 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Dod03g2232 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 9 72 - -
Dod03g2232 73 SMART sant 23 71 IPR001005 -
Dod03g2232 73 Gene3D - 26 69 - -
Dod03g2232 73 MobiDBLite consensus disorder prediction 9 23 - -
Dod03g2232 73 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Dod03g2232 73 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 9 72 - -
Dod03g2232 73 MobiDBLite consensus disorder prediction 1 27 - -
Dod03g2232 73 CDD SANT 29 67 IPR001005 -
Dod03g2232 73 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 73 IPR017930 -
Dod03g2232 73 SUPERFAMILY Homeodomain-like 25 69 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2232 Dod-Chr3 52330242 52332080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2232 27 70 MYB Transcription Factor Family AT5G14750 52.273 1.97e-13 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod03g2232 Myb_DNA-binding 2.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2232 - - gmx:100500494 119.398