Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2231 ATGTCTGAATTCAACACACACATCCCAACTACTTTTGATCCCTTTGCTGAGGCAAATGCTGCGGACTCAGGTGCTGGGACGAAAGAGTATGTTCACGTGCGTGTACAACAGCGTAATGGAAGGAAAAGCCTAACAACTGTTCAAGGATTAAAGAAAGAGTACAGCTATAGCAAGATACTCAAGGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCCAGGACCCTGAGTTGGGCCAGGTCATACAACTTCAGGGAGATCAACGGAAGAATGTTTCTACTTTCCTTGTGCAAGCGGGCATAGTAAAGAAGGAGCACATCAAGATTCATGGTTTCTAA 342 0.4415 MSEFNTHIPTTFDPFAEANAADSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2231 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Dod03g2231 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Dod03g2231 113 Gene3D - 2 113 - -
Dod03g2231 113 SUPERFAMILY eIF1-like 5 113 IPR036877 GO:0003743|GO:0006413
Dod03g2231 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Dod03g2231 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Dod03g2231 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Dod03g2231 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Dod03g2231 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 7 113 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2231 Dod-Chr3 52322465 52325546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2231 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 87.611 4.83e-74 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2231 K03113 - gmx:100784390 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2231 03 52322465 52325546 Dod03g2231 03 52322465 52325546 ECH