Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2225 ATGGTTGAACGAAAGCAATTCAAGACAAGGTTATGTGTTCTTTATCAGAGAGGACGCTGCACGCGCCACAATTGCTCCTTCGCGCATGGGAGTGCTGAGTTGCGAAGGTTCTCTGCCTCATATGGCGGTAGGGGAGATTATTTAGCCAATGACTTGAGGGATAAACTTGACAGAAGGTATTTATCACCACCACGAAGGTACTCACCAGCTCGAGATGGAAGAGGCCGCCAGGCCATTCGTGAATACAGTCCCTCAAGGTCCTTGGACAAAAAAAGTGACAGAAGACATAGGAGAAAACAGGGCATTACTGGCGAAAGTGATAAAATCTCGGATAGAATTCAAGATCAAGTTAAAGAAGGAAAACGGCTTTCCTTTGGTTCTAGAAATACACTTGAGGAGCAGCTCAAGAAGGTACAATCAGATATCAACACTTTTGAGATCCGAAGATTTGAACTGTCGGTCTTCCTGGATGAGAGTGTTCAAGAAGTGGATAGCCTCAATTCTAGAATACAGGAACTCGAGGCTCAATTAGGCCAAGAGAATGAGGAGTGTAAAAGAATTGATTCAAGAATAAGGAAGTTTGTTGGAGCGTACAATCGTAATTCACAGTTAGAAGAAGAACTAAAGAGTTCACAGGTTCGACTTCAAAGGTTTGGTGATCAGCTTGTCTCAGATATTACTAGAATTGGTGCCAATGAAGAAGATTTAAGCATTGATATTGTAAGCAATGGTGAGAATACCGGTCTTCCTCCAATCATCAAACATAATGTGGAAAAAAACGATGCATCTCTCCATGGAAAAAGGCTGTATGCTGAACGAGATGCGGCGGAGGAGTTAAGACAAGGAAGAAACAGGAAGTGGTCTCGTTGGAATTTGCCTGTTCAATTGAATGACAAGGATTATGAGGGCCTTGACGCCCCAAACAATGACACTGAAGTTACTAGGCCCCAAGATCTTGAAGGAAGGCACAAGAGAGGAAGGTGGAATTCTTCTAACAACCTAAGTTCAGAAAAGTTGAAAGAATCCAAGATTGAAGTGCCGTCAACCAGCATGGCAGCTCATGTGGTTGATGAGGAAGTTGATATTGAACTTGATGACAGAATTGATGTCAACGAACCTGCAAATACAGAAGATGAGAATGGAGCGGCATTAGAGGTGAAGGCTTTACTGCCTATGCTTCCCCCAGCTTTGATTCCTCGGAGCAATTATTCGCAGTATGAGGGTGACGACGAGAAGGTGGATGTGGATGGTCTTGATGAAGGGGCAGCAGGGGCGCATGCAGATATTGTCTGA 1293 0.4393 MVERKQFKTRLCVLYQRGRCTRHNCSFAHGSAELRRFSASYGGRGDYLANDLRDKLDRRYLSPPRRYSPARDGRGRQAIREYSPSRSLDKKSDRRHRRKQGITGESDKISDRIQDQVKEGKRLSFGSRNTLEEQLKKVQSDINTFEIRRFELSVFLDESVQEVDSLNSRIQELEAQLGQENEECKRIDSRIRKFVGAYNRNSQLEEELKSSQVRLQRFGDQLVSDITRIGANEEDLSIDIVSNGENTGLPPIIKHNVEKNDASLHGKRLYAERDAAEELRQGRNRKWSRWNLPVQLNDKDYEGLDAPNNDTEVTRPQDLEGRHKRGRWNSSNNLSSEKLKESKIEVPSTSMAAHVVDEEVDIELDDRIDVNEPANTEDENGAALEVKALLPMLPPALIPRSNYSQYEGDDEKVDVDGLDEGAAGAHADIV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2225 430 MobiDBLite consensus disorder prediction 300 346 - -
Dod03g2225 430 Coils Coil 156 190 - -
Dod03g2225 430 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Dod03g2225 430 MobiDBLite consensus disorder prediction 401 430 - -
Dod03g2225 430 Gene3D - 1 36 - -
Dod03g2225 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 422 - -
Dod03g2225 430 MobiDBLite consensus disorder prediction 59 110 - -
Dod03g2225 430 Coils Coil 128 148 - -
Dod03g2225 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 422 IPR045868 GO:0046872
Dod03g2225 430 Coils Coil 201 221 - -
Dod03g2225 430 MobiDBLite consensus disorder prediction 59 90 - -
Dod03g2225 430 MobiDBLite consensus disorder prediction 405 421 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dod03g2225 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2225 - - aprc:113858008 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2225 03 52255248 52262747 Dod03g2225 03 52255248 52262747 ECH