Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2216 ATGGGAGTCAGATCCAGGCTAATACTAACCGAATTGCTGGAACATATGGATACATGGCGCCTAAATATATTAAGAGCTGGGAACTTCTCAATCAAATCCGATGTCTATAGCTTTGGCATTTTGGTTTTGGAAATTCTGGCAGGTCAAAAGAACTCTCACTTTCGCAATTCAACAAATATTCAAAGCTTTGCATGGCAACAATGGTCCAATGGAACAGCTTTGGACATGGTTGATCCAGCACTAGGTGATCAGTGGCCAAGACAAGAAGTTTTGAAATGCATCCATATTGGGTTATTGTGTGCTCAAGAAGCTGCCACTTATAGACCTACAATGTCAGAAATTGTTACCCTGCTTGATAGTTACACCGTGATCTCCCCAGCACCAACAAGACCAGCATTTTTTGCGCCAGTGAATGGATTGCCATATTTGACAATGGAAAATCAAAGTACATCACAGCCTGATGATCGATCTATGTCTGGATCATTGCCACAACAATCTATGAATGAGGTTACAATTTCTGACTTGGATCCTCGCTAG 537 0.4153 MGVRSRLILTELLEHMDTWRLNILRAGNFSIKSDVYSFGILVLEILAGQKNSHFRNSTNIQSFAWQQWSNGTALDMVDPALGDQWPRQEVLKCIHIGLLCAQEAATYRPTMSEIVTLLDSYTVISPAPTRPAFFAPVNGLPYLTMENQSTSQPDDRSMSGSLPQQSMNEVTISDLDPR* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2216 178 MobiDBLite consensus disorder prediction 144 172 - -
Dod03g2216 178 Gene3D Transferase(Phosphotransferase) domain 1 11 129 - -
Dod03g2216 178 SUPERFAMILY Protein kinase-like (PK-like) 25 150 IPR011009 -
Dod03g2216 178 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 27 150 - -
Dod03g2216 178 Pfam Protein tyrosine and serine/threonine kinase 23 118 IPR001245 GO:0004672|GO:0006468
Dod03g2216 178 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 150 - -
Dod03g2216 178 MobiDBLite consensus disorder prediction 144 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2216 Dod-Chr3 52141760 52142919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2216 27 178 Receptor kinase-like Gene Family AT4G23150 46.452 2.51e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g2216 PK_Tyr_Ser-Thr 3.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2216 - - twl:120000997 191.43