Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2210 ATGGGCGATGGAGGAGTTGCGTGCATGCCTTTGCAGCAGCAGCAGCAGCAGCACCATGTTGCGGAGAAGGCGCTTTGCGGAGCCAGCAATGGCAGCGGGTTCAATTCTAAGTTGGTCAAGGTTGCTGATGGCGCCGAGAGGAGGAGGAGGAAGAAGAAGAAGAAGGTGGTGAAGGTGAAGAAGAAAGTGGTGCCATTGGTGAAGAAGAAGGAGGTTGGACTTGGAGGAGCTGGGAATTGTGAATTGGTAGTGGACAGAGTGTGCAATGGTGTTGAGAGTGGCGAAGTGGAAGAAGGTGAATTGGGGACTTTGAATGAGCTGGAAAACGGGGAGTTTGTGCCTGAGAACCTGCCACCACCGCCGCCGCTTCCACCTCAGCGAAGAAGTAAGATTGAGAGTGGGGAGAGAGTGCGTGGAAGGGGGAGGAAGGAGAATGTGGAGAGAGGTGGCAATGGCATGAAGGATGAAATTGAAAAGGGTGAGTTCATTCCGGATAGGTGGCATAGGGGAGACATGGGGAAGGATGATTACGGTTACAGCAGTAGTAGCCGTAGTTACCAGTCTGGAAGGGACAAAGGGTGGAAGTGTGAACGTGAAAGGACCCCGCTATCGGGGAGATATGCCGGTGATGACTTCTTGAGAAAGAAGGAATTGAATAGAAGTCGGGGTGGGAGTCAGCATGGTAAGAGTACTCCCCGGTGGGAGAATGGACAAGAGAGAAGTGTAAGGCTCTGTTCCAAGATTGTGGATGAAGAAAGAAAGGAACACACCGATGCTAGAAATGAGCACAACAATGGTAGGAGCCATTCGCGGGACCACTCTTCTGGAGGTCGGTTGAAGAGGCATGGTAATGATTCTGACGGGTGTGATCGTAAGCAGTATGGAGATTATGCTGGGTTGAAAAGCCGAAAGCTTTCTGATGATGGCTCGCGCCATGTTTATTCGGAGCACTATTCTCGTCACTCTGTGGAGAGATCTTATAGAAGTAGTTCTTCAAAATTATCAGCAGACAAGTATTCTTCTAGGCATCATGAATCTTTGTCTGGCAGACCTGGTTATGACAGGTACGGACGTAGCCCTGGTCATTCTGAGCGGTCACAACATGATCGAGCCAGGTGTTATGACCATAAGGAGTGCGCTCTGGCACGCCGATCACCCTATGGCAGGGATAAATCTCCTCATGGTCGAGAAAAATCTCCTTATGATAGGCGTAGAAGTCATCACCATGACCATAAATTAAGGAGTCTTGCTCATGCTGAGCGATCCCCACAAGATCGTAGTCGGCATCATGATCGTATGGACTGTACGCCAAATTCAGTAGAGAGATCCCCACTTGATCGATCTAGGCAAAATATTCATGGAGAAACTATTAGCCAAACCATATCAAGTGAAAAACCGAACTTGAATCATAGTTGTAAGGATGAAGAGAACCACATCCAAAAGGAGTCAAATGTTTCAAGTATAGAATCTCACGGTGAAAGAAATGTGCATGATACCAATGGGTCTGTTGACAAAGACAACTGCAATGAACCTGAAAAGGAACAGCAATCCAGCAGCCCAATTGTAAGCTCCAAAGCCTCTGCTTGCTTGGAGCCGCCTCCTGAGGAGCTGCCTTCTATGGAAGAAGACATGGATATATGTGATACCCCTCCTCATGTCTCTTTGGTGTTGGATTCATCATTAGGGAAATGGTTTTACCTCGATTATAGTGGCGTAGAACATGGACCTTCTAAACTGTCTGACATCAAGGCCCTTGTTGATGATGGTATACTAATGTTGGATCACTTTATAAAGCACTTAGATAGCGACAGGTGGGTAACTGTTGAAAATGCAGCATCACCATTGGCAGCTGTGAGTTTTCCGTCGGTTGGGTCAGACAGCATAACCCAGCTTGTAAACCCTCCAGAGGCTCCTGGTAATCTTTTGGCAGATACTGGAGATACTGTTCAATCTGGTCCAGCGAATTTTCAGGAAATGCGGGCCCCTTTGCTGCAGCCAATTATATGCCCTGATGACAGCGTGCTTGCATCGGAAAGTTTGGAGGACCTCCACATCGATGAAAGGGTTGGGGTCCTGTTAGAGGGTTATGATGTCATTCCTGGAAGGGAGCTTGAGGCAATAAAAGAAGCTTTGCAAATTAATTTTGAATATGCAAAATGGGAGGGATTGGGAGACTATGATGGTTTTCCTTGGCATGATAATTGCCCTAGCATAGAATGTGATTCAAGAATTGATTTAGCATCAAGAGAATCCGAGTCTCAGTTAGATATGCCTTCTGACAAGGATAATGGTTTTGCCTTTGGTGTCCCTGGTCACTGGTTTTCTGCTCCGTGGTCATGCAAAGGTGGTGACTGGATGAGAAATGATGATGCCCAAGATAGATATTGTAGGAAGAAACTTGTCCTAAATGATGGGTTTTCATTATGTCAAATGCCTAAGTCTGGATGTGAAGATCCTCGCTGGCCTCAAAAAGATGACTTGTATTATCCTTCTTACAGCAGGAGGCTTGATCTTCCTCTTTGGGCTTTTTGTACTGATGAGTGGGTTGATTGCAGTGCTGTGAGCAGACTGGTTCAAAGTAAGCTTGCTTCTGCTGTTAGAGGAGTGAAAGGAAATATTCTTTCAGTGGTCAGGATAAATGCGTGTGTTGTCAAGGACTGGGGATCCCATGTCTGTGAGTCACGTCACAAGGCCCGAGGCAAGGATAGGTATCATTCAAAGTTAGCTCGGCCTTTGTCTTCAGCCAGTGATAGCAAGAGATCATCAACTGAAGAAGATTCTCAGTCAAAAGCTGTTAATGACTATAGTTCTCAAGGCTCTTGCAGGAGCATGGAATTCATTGATATTCCTAGAGATCATCTCTGTACTGTCAGCGACTTACAGTTACACTTGGGTGACTGGTATTATCTTGATGGTTCTGGGCGGGAAAGAGGGCCTTTGTCATTTTCGGAGCTGCAGCTTCTAGTAGACCAGGGAATTATCAAAAAGTATAGCAGTGTGTTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACCTCATCTGCTGAAACTTCCGATGTCAGTCTCAGGAACCACCAAGAAAACAGTCCAGTGTCTGGTGAATCTTTTAGACATCCATCAAAGCAAACTTGTGGTGTTTCACTCAGTGAATCTTTCACTAATGCAAATTTGTTTAACAGCTTACACCCTCAGTTTGTTGGTTATACACGTGGGAAGCTACATGAATTGGTAATGAAATCATATAAAAGCCGGGAAATTGCTGCCGCCATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAATCGAGAAACAAATATGTTGGAAATCAGGTGATTCACGTGCTTCCAGAAGAGCGCGGATGCTGGTTGGTGATAGTGAAGAGGGCAGTGATTCGGAAGATGTCAGCCTGACTATTGGGAAGGATGAATCCAATTTTGAGGATCTATGTTGTGATGCTAACTTCTTTGGAAAAGAAAGCATCATCAGTGGTTCTGAGGCGGGTAGCTGGGGCTTACTGGATGGTCGTATATTGGCAAGAGTCTTCCACTTTTTGAGATCTGATTTGAAGTCCCTAGTCTTTGCATCCATGACTTGCAAGCATTGGTGGGCTTCTGTAAGGTTTTACAGAGAAGTCTCAAGACAGGTCAATTTGTCATCCTTGAGTCATTCTTGCACGGATCCCATATTGTGGAACATTATGAATGCGTTTGAGAAAGACAATATCAAATCTATGATTCTAATGGGTTGCACCAATATTACTGCTGATATGCTTGAGAAAGTACTTCTTTCATTTCCTAGTATATCTACAATAGACATTAGAGGCTGCAGCCAGTTTGGAGAGTTGACTGCTAAATTTACCAATGTAAAATGGATCAAAAGCCAAAGTTCACGTGTAGGTAAAATTGAGGAGCCACATAAAATCAGAAGCCTTAAGCAAATTACTGAACAAACCTCATCTGTTTCCAAGGCCAGCAGTTTATTTGTTCGGGATGATTTTGGTGAGCTGAAGGATTATTTTGCTAGTGTGGATAAGAGGGACTCAAAGCAATTATTCCGTCAAAACTTATACAAGCGATCAAAATTATATGATGCTAGAAGGTCCTCTTCTATTCTATCTAGGGATGCTCGTACAAGACGATGGTCAATTAAGAAACCTGATACTGGTTACAAGAGGATGGAGGAATTGCTTGCTTCAAGATTGAGGGAAATCATGAAGGAAAACTCCTGTAATTTTTTTGTACCTAAGGTTGCAGAAATTGAGGCTAAAATTAAAACTGGTTATTACAGTGGGCATGGGTTGAGCTCTGTCAAGGAGGACATTGGTAGAATGTGCCGTGATGCAGTAAAAGCAAAGAGTCGGGGTGATGCTAGTGATGTGAATCATGTTATCACATTACTTATTCAGCTTGCAACACGGTTGGAGGAGAGTTCTAAATATGTGAATGACAGAGATGCACTATTGAAGTTTTGGAGAAGTGATTCACCGTTGGAATTCTGTTCTACTTCCTCCAAGTATAAGACGAATAAATTGATGAATGAGAGGAAGTATAGGAGTAATGGAACACGGGGTGGTTTGGATAATGGAGGGTATTTCTCTGATCGGGAAATTAGGAGGTCCTTATCAAAGTTGAATAAAAAATCAATGGACTTAGAGAGTGAGACATCTGATGACCTTGACGGGTCTTCTGAAGATGACAAGAGTGACAGTGACATTACAACCTCTGGCACTGAAAGTGACCAAGATGTCCATTCAGAAAGTCGAATTGGGGAGTTGAGAGGAGATGGAAACTTCGCACCTCATGATGGGATGGATTTCATAACTGATGAGCGTGAATGGGGAGCTCGTATGACCAAAGCAAGTCTGGTTCCTCCTGTCACTCGAAAATATGATGTCATTGATCAATATATCATTGTAGCTGATGAGGAGGATGTGCGGCGGAAGATGCGGGTTTCGTTGCCAGATGGCTATTCAGAGAAGTTAAGCGCACAGAAGAATGGAACTGAGGAGTCTGATATGGAATTGCCTGAGGTGAAGGATTACAAACCTAGAAAGAAGCTTGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCCTACACGCACAATCTTTTACTTGATTCTATGCCAGAGGAGTTGGATTGGTCTCTACAAGAGAAGCATTTGTTTGTAGAAGACATACTCCTTCAGACATTGAATAAGCAAGTTAGGTATTTTACTGGAACTGGAAACACTCCAATGAGCTACCCTTTGCAGCCTGTTATTGAAGAAATTGAAAGGTGCGCTGAGGAGGCATGTGATGTAAGGATGGTGAGAATGTGTGAAGGGATCCTAAAAGCCATTGACAGTCGTCCAGATGACAAATATGTTGCTTACAGAAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGATGGCTTTGGTGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTATATCCTGTGTGGAAATGGTTCGAGAAACAAGATGGTATTCGATCACTTCAGAAAAATAGTAATGATCCAGCACCAGAATTCTACAACATTTACCTTGAGAGGCCAAAGGGTGATGCAGAAGGGTATGACTTAGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGAATATGTCATTCATGCCGACCTAATTGTGAAGCAAAAGTTACTGCTGTTGATGGTCATTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGGGAGGAGGTCACTTTTGATTACAATTCTGTTACAGAGAGCAAGGACGAATATGAAGCATCAGTTTGTTTGTGTGGGAGCCAAGTTTGCCGTGGGAGCTATCTGAATCTGACTGGTGAAGGGGCTTTTGAAAAGGTACTGAAGGAGTGGCATGGAATTCTTGATAGTCACTATTTGATGCTAGAAGCTTGTGAATTAAACTCCGTCTCTGAAGATGACTATAATGACTTGGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGTCTTCCAGATTGGCTAGTTGCATATGCAGCTCGCCTGGTGAGATTTGTTAATTTTGAACGAACAAAACTTCCCGAGGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATACTTCTCAGATATATGTCTCGAAGTTGAGAGGAGTGATGCAGAGGTTCAGGCTGAGGGTGTGTACAACCAGAGGCTTCAGAATCTTGCTGTCACTCTTGACAAGGTAAGGTATGTTATGAGATGTATTTTTGGTGATCCACGGAAAGCTCCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAGTTGTTTCCTTCCTCTGGGAAGGAGAGGATTCATTGGTTGAGGAGCTTCTTCAATGTTTGGCTCCTCATGTGGAAGAGTCTACCTTGAATGATCTGAAGTTCAAAATTTGTGCTCGGGATCCTTTAAGTTCTCAAGATATTCAAAAGGAGGTTCAGAGATCTCTATTATGGTTGAGGGATGAGGTCCGAAATCTTCCTTGTACATACAAATGTCGGCATGATGCAGCTGCTGATTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGAATACGGGATTATCAAACTATTACTTCACCACCTGTTTATATTAGCCCGCTTGACTTAGGCCCCAAGTACACTGACAAGTTAGGAGCAGGATTTCAGGAGTACCGGAAGATATACAGTGAAAATTATTGCTTAGGGCAGCTAATTTTTTGGCATAATCAGAGCAATACAGAGCCAGAATGTACCCTGGCTAGAGCCAGCAGGGGTTGCTTGTCATTACCAGACATCGGTTCCTTTTATGCGAATGTTCAGAAACCTTCACGGCATCGTGTTTATGGTCCGAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAGCAGCCCCAGAGACCTTGGCCCAAAGACCGGATCTGGTCATTCAAAAATTCTCCCAGAATTATTGGCAGCCCAATGTTAGATGCTGTGATAAATAACTCTCCGCTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACGTAGCATTTTCCAGGCCATGTGGGACCAGTGA 7068 0.4385 MGDGGVACMPLQQQQQQHHVAEKALCGASNGSGFNSKLVKVADGAERRRRKKKKKVVKVKKKVVPLVKKKEVGLGGAGNCELVVDRVCNGVESGEVEEGELGTLNELENGEFVPENLPPPPPLPPQRRSKIESGERVRGRGRKENVERGGNGMKDEIEKGEFIPDRWHRGDMGKDDYGYSSSSRSYQSGRDKGWKCERERTPLSGRYAGDDFLRKKELNRSRGGSQHGKSTPRWENGQERSVRLCSKIVDEERKEHTDARNEHNNGRSHSRDHSSGGRLKRHGNDSDGCDRKQYGDYAGLKSRKLSDDGSRHVYSEHYSRHSVERSYRSSSSKLSADKYSSRHHESLSGRPGYDRYGRSPGHSERSQHDRARCYDHKECALARRSPYGRDKSPHGREKSPYDRRRSHHHDHKLRSLAHAERSPQDRSRHHDRMDCTPNSVERSPLDRSRQNIHGETISQTISSEKPNLNHSCKDEENHIQKESNVSSIESHGERNVHDTNGSVDKDNCNEPEKEQQSSSPIVSSKASACLEPPPEELPSMEEDMDICDTPPHVSLVLDSSLGKWFYLDYSGVEHGPSKLSDIKALVDDGILMLDHFIKHLDSDRWVTVENAASPLAAVSFPSVGSDSITQLVNPPEAPGNLLADTGDTVQSGPANFQEMRAPLLQPIICPDDSVLASESLEDLHIDERVGVLLEGYDVIPGRELEAIKEALQINFEYAKWEGLGDYDGFPWHDNCPSIECDSRIDLASRESESQLDMPSDKDNGFAFGVPGHWFSAPWSCKGGDWMRNDDAQDRYCRKKLVLNDGFSLCQMPKSGCEDPRWPQKDDLYYPSYSRRLDLPLWAFCTDEWVDCSAVSRLVQSKLASAVRGVKGNILSVVRINACVVKDWGSHVCESRHKARGKDRYHSKLARPLSSASDSKRSSTEEDSQSKAVNDYSSQGSCRSMEFIDIPRDHLCTVSDLQLHLGDWYYLDGSGRERGPLSFSELQLLVDQGIIKKYSSVFRKCDKLWVPVTSSAETSDVSLRNHQENSPVSGESFRHPSKQTCGVSLSESFTNANLFNSLHPQFVGYTRGKLHELVMKSYKSREIAAAINEVLDPWINARQPKKEIEKQICWKSGDSRASRRARMLVGDSEEGSDSEDVSLTIGKDESNFEDLCCDANFFGKESIISGSEAGSWGLLDGRILARVFHFLRSDLKSLVFASMTCKHWWASVRFYREVSRQVNLSSLSHSCTDPILWNIMNAFEKDNIKSMILMGCTNITADMLEKVLLSFPSISTIDIRGCSQFGELTAKFTNVKWIKSQSSRVGKIEEPHKIRSLKQITEQTSSVSKASSLFVRDDFGELKDYFASVDKRDSKQLFRQNLYKRSKLYDARRSSSILSRDARTRRWSIKKPDTGYKRMEELLASRLREIMKENSCNFFVPKVAEIEAKIKTGYYSGHGLSSVKEDIGRMCRDAVKAKSRGDASDVNHVITLLIQLATRLEESSKYVNDRDALLKFWRSDSPLEFCSTSSKYKTNKLMNERKYRSNGTRGGLDNGGYFSDREIRRSLSKLNKKSMDLESETSDDLDGSSEDDKSDSDITTSGTESDQDVHSESRIGELRGDGNFAPHDGMDFITDEREWGARMTKASLVPPVTRKYDVIDQYIIVADEEDVRRKMRVSLPDGYSEKLSAQKNGTEESDMELPEVKDYKPRKKLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFVEDILLQTLNKQVRYFTGTGNTPMSYPLQPVIEEIERCAEEACDVRMVRMCEGILKAIDSRPDDKYVAYRKGLGVVCNKEDGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSNDPAPEFYNIYLERPKGDAEGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVRKIQHGEEVTFDYNSVTESKDEYEASVCLCGSQVCRGSYLNLTGEGAFEKVLKEWHGILDSHYLMLEACELNSVSEDDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFVNFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEAVVSFLWEGEDSLVEELLQCLAPHVEESTLNDLKFKICARDPLSSQDIQKEVQRSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIRDYQTITSPPVYISPLDLGPKYTDKLGAGFQEYRKIYSENYCLGQLIFWHNQSNTEPECTLARASRGCLSLPDIGSFYANVQKPSRHRVYGPRTVRSMLARMEKQPQRPWPKDRIWSFKNSPRIIGSPMLDAVINNSPLDREMVHWLKHRRSIFQAMWDQ* 2356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2210 2355 MobiDBLite consensus disorder prediction 129 175 - -
Dod03g2210 2355 Gene3D SET domain 1767 1956 IPR046341 -
Dod03g2210 2355 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 140 - -
Dod03g2210 2355 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 127 2355 - -
Dod03g2210 2355 MobiDBLite consensus disorder prediction 110 538 - -
Dod03g2210 2355 MobiDBLite consensus disorder prediction 468 512 - -
Dod03g2210 2355 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1936 2355 IPR045606 -
Dod03g2210 2355 CDD SET_SETD2-like 1799 1947 - -
Dod03g2210 2355 ProSiteProfiles SET domain profile. 1786 1925 IPR001214 GO:0005515
Dod03g2210 2355 MobiDBLite consensus disorder prediction 337 404 - -
Dod03g2210 2355 MobiDBLite consensus disorder prediction 441 467 - -
Dod03g2210 2355 MobiDBLite consensus disorder prediction 190 223 - -
Dod03g2210 2355 MobiDBLite consensus disorder prediction 413 437 - -
Dod03g2210 2355 MobiDBLite consensus disorder prediction 1550 1610 - -
Dod03g2210 2355 MobiDBLite consensus disorder prediction 244 327 - -
Dod03g2210 2355 SMART set_7 1791 1931 IPR001214 GO:0005515
Dod03g2210 2355 Pfam SET domain 1870 1925 IPR001214 GO:0005515
Dod03g2210 2355 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 140 - -
Dod03g2210 2355 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 127 2355 - -
Dod03g2210 2355 SUPERFAMILY SET domain 1800 1948 IPR046341 -
Dod03g2210 2355 Coils Coil 42 62 - -
Dod03g2210 2355 MobiDBLite consensus disorder prediction 902 936 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2210 Dod-Chr3 51877071 51890459 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod03g2210 SET 8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2210 K22748 - gmx:100781921 3549.6