Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2194 ATGATGAAGTGTGAGTTGTGCAAGGTTCAGGCGAGGATTTTCTGCGAGTCGGACCAGGCAAGCTTATGCTGGACCTGCGACGCCAAGGTTCATAGCGCCAACTTCCTTGTGGCAAGGCACTCCAGGTCGCTCCTCTGCCGCGCGTGCAATTCCCTCACACCGTGGAAGGCCACCGGCGCCGCCCTCGCCAACGCCGTCTCCGTCTGCGACCGCTGTGCTAACGGAGAACGACAAGAACAAGACGAAGAGAGCGAAGGAGGGAACCACGTCGTCGAGACAGACACCGAGGACGACGACGAAGACGGTGACAATCAGGTTGTCCCTTGGTCCCCCTCGACGCCGCCGTCTCTGTCGGCATCCAGTTCCTCCGGCGGCGAAGAGTCGGTTGACGGCGATGGTGATGGTTATGAGCAGCAGGCGGCGGCGACGACAACGACAGCAACCTCGTTGAAACGACAACGTGAGGACGATGGTTAG 477 0.6038 MMKCELCKVQARIFCESDQASLCWTCDAKVHSANFLVARHSRSLLCRACNSLTPWKATGAALANAVSVCDRCANGERQEQDEESEGGNHVVETDTEDDDEDGDNQVVPWSPSTPPSLSASSSSGGEESVDGDGDGYEQQAAATTTTATSLKRQREDDG* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2194 158 MobiDBLite consensus disorder prediction 106 127 - -
Dod03g2194 158 MobiDBLite consensus disorder prediction 75 158 - -
Dod03g2194 158 MobiDBLite consensus disorder prediction 75 91 - -
Dod03g2194 158 SMART bboxneu5 1 45 IPR000315 GO:0008270
Dod03g2194 158 PANTHER - 1 157 - -
Dod03g2194 158 CDD Bbox1_BBX-like 3 45 - -
Dod03g2194 158 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Dod03g2194 158 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Dod03g2194 158 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2194 Dod-Chr3 51579418 51580708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2194 3 98 C2C2-CO-like Transcription Factor Family AT4G27310 52.941 1.81e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod03g2194 zf-B_box 5.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2194 - - gmx:100782655 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2194 03 51579418 51580708 Dod03g2194 03 51579418 51580708 ECH
Dod10g1330 10 33416019 33417556 Dod03g2194 03 51579418 51580708 PCT