Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2187 ATGAACAAGCCATCGTTCTGGCTTTCTCTTCTCATCATCTTCTTCTCTTTTCATCCCTATACTTCCCATGCAGCTTTGACCTCCATCACTGCAAACCAATCTCTCTCTGGTGATCAAACGCTTGTTTCCAAAGATGGGAACTTTGAATTGGGTTTCTTCAAGCCAGGTAACTCCTCTAACTACTATATAGGCATGTGGTACAAAAAGGTGTCTCAAAGAACATATGTTTGGGTAGCAAATAGAGATAACCCAGTTTCTGACAAGAATTCTGCCACCTTAACAATATCTAGGGGCAATTTAGTGCTCTTGGACCAGTATCAAAATATAGTTTGGTCAACAAATATTAGTTCTCCTAGCTCAGGTTCTCCAGTAGCTGTGCTTCTAGATGCTGGGAATCTCATATTAAGCGATAGGCCTAACCCATCAGAATCAGAAGCTTTATGGCAAAGTTGGGATCATCCAACAGATACATGGCTTCCTGGTGGCAAAATTATTCTTGACAACAAAACCAAGAAGCCTCAATATCTCACAACATGGAGGAACAGTGAGAATCCTGGCACAGGCTTATTCTCTTTTGAGCTAGACCCCAAAGGGACCAATGCATATTTTATTCTTTGGAATAAGTCTGTTCAGTATTGGACAAGTGGTCCTTGGAATGGCCACATTTTCAGCTTGGTTCCTGAGATGAGGCTAAACTACATCTACAATTTCAGCTTCCAGATCAATGAGAACGTGAGCTACTTCACTTACTCCTTGTACAACTCTTCAATTATGTCCCGTTTTGTGCTGGATATCTCGGGGCAGATCAAGCAGCTCACATGGTTGGAGAATACTCAGCAGTGGAACTTGTTTTTGTCACTGCCAAGAAAGCAGTGTGACGTTTATGCCTTCTGCGGTGCATTTGGTAGCTGCAATGAGAACTCCATGCCATTCTGCAATTGTTTGACTGGTTATGAGCCAAGGTCACAAGCTGATTGGAATCTTGAGGATCACTCAGGTGGGTGTGTGAGGAAAACCAAGTTCCAATGTGAGACATCAAATCCTTCTAGTGGTGCCAAGGACAGGTTCCTAGCTATCCCCAACATGGCATTGCAGAATACAAGTGCACAATCTGTGAGAGCTGGGAGTGCTGGGGAATGTGCTTCAACCTGCTTGAGCAACTGTTCCTGCACTGCTTATGCATATGACAGTAATGGCTGTTCAATTTGGAGTGATGATATCTTGAATTTGCAGCAGCTTTCTCAAGGTGATAGCAGTGGAGAGACCTTGTTTCTTAGGCTTGCAGCATCTGAGTTTGATGATACTAAAAGCAGTAAGGGGACAATCATCGGTGCTGTTGCTGGTGCTGTTGGTGGTATAGTGGCTATCCTAGCACTTCTCCTATTTGCCTTGATGAGGAGAAGGGGACGTGTCGGAGCAGGAACATCGATGGAGGGTTCATTGGTGGCATTTGGGTATAGGGATCTGCAAACTGCAACAAAGAACTTCTCAGAGAAATTGGGAGGAGGAGGTTTTGGTTATGTCTTCAAGGGGACACTGCCTGATTCAAGTGTCATAGCAGTGAAGAAGCTTGAGAGCATTAGCCAAGGTGAGAAGCAGTTCAGGACAGAAGTGAGCACAATCGGGGCAGTCCAACATGTGAATCTTGTAAGGCTTCGCGGCTTCTGCTCCGAAGGTTGGAGGGAAATGCTGAGATTGAAGGAGATCACTAGAGTCATCAAGGTTGCATCTTGGTGTGTCCAAGATGATGAGACTGATAGGCCATCCATGGGTCAGGTGGTTCAAATCCTTGAAGGGGTGTCGGATGTGGCTTTCCCTCGGGTGCCAAGATCACTACAAGCCTTTGTTGACAACCAGGAGAGCATAGTTTTCTTCACTATGTCAAGCTCTACACAGAGTTCACAGATTCGGGTTTGGCCAGAGCGCTTGCCGACTATGCATCTTCTTGGTTACGATGATATTTTTACGACAAACACGACTCTCACTAGAGTGAGAGCTGTTCCTCAGTATAGCTTTGGCATTGACACTCTGGAGTCACTAAATAATACGCCCAACCGTATGGATTATGGCATCGGGCCTTCCATGGGCAAAGAAATCGCTCAATAA 2106 0.4501 MNKPSFWLSLLIIFFSFHPYTSHAALTSITANQSLSGDQTLVSKDGNFELGFFKPGNSSNYYIGMWYKKVSQRTYVWVANRDNPVSDKNSATLTISRGNLVLLDQYQNIVWSTNISSPSSGSPVAVLLDAGNLILSDRPNPSESEALWQSWDHPTDTWLPGGKIILDNKTKKPQYLTTWRNSENPGTGLFSFELDPKGTNAYFILWNKSVQYWTSGPWNGHIFSLVPEMRLNYIYNFSFQINENVSYFTYSLYNSSIMSRFVLDISGQIKQLTWLENTQQWNLFLSLPRKQCDVYAFCGAFGSCNENSMPFCNCLTGYEPRSQADWNLEDHSGGCVRKTKFQCETSNPSSGAKDRFLAIPNMALQNTSAQSVRAGSAGECASTCLSNCSCTAYAYDSNGCSIWSDDILNLQQLSQGDSSGETLFLRLAASEFDDTKSSKGTIIGAVAGAVGGIVAILALLLFALMRRRGRVGAGTSMEGSLVAFGYRDLQTATKNFSEKLGGGGFGYVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGAVQHVNLVRLRGFCSEGWREMLRLKEITRVIKVASWCVQDDETDRPSMGQVVQILEGVSDVAFPRVPRSLQAFVDNQESIVFFTMSSSTQSSQIRVWPERLPTMHLLGYDDIFTTNTTLTRVRAVPQYSFGIDTLESLNNTPNRMDYGIGPSMGKEIAQ* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2187 701 Gene3D Phosphorylase Kinase; domain 1 463 566 - -
Dod03g2187 701 ProSitePatterns Protein kinases ATP-binding region signature. 500 523 IPR017441 GO:0005524
Dod03g2187 701 Pfam Protein tyrosine and serine/threonine kinase 496 559 IPR001245 GO:0004672|GO:0006468
Dod03g2187 701 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544
Dod03g2187 701 Gene3D - 21 151 IPR036426 -
Dod03g2187 701 SMART ntp_6 351 427 IPR003609 -
Dod03g2187 701 CDD PAN_AP_plant 349 428 - -
Dod03g2187 701 ProSiteProfiles Protein kinase domain profile. 494 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2187 701 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 567 626 - -
Dod03g2187 701 CDD B_lectin 32 154 IPR001480 -
Dod03g2187 701 Gene3D - 620 698 - -
Dod03g2187 701 SMART blect_4 32 154 IPR001480 -
Dod03g2187 701 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 219 IPR036426 -
Dod03g2187 701 ProSiteProfiles PAN/Apple domain profile. 343 428 IPR003609 -
Dod03g2187 701 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 567 626 - -
Dod03g2187 701 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 4 564 - -
Dod03g2187 701 Pfam PAN-like domain 351 409 IPR003609 -
Dod03g2187 701 Pfam D-mannose binding lectin 74 180 IPR001480 -
Dod03g2187 701 SUPERFAMILY Protein kinase-like (PK-like) 477 560 IPR011009 -
Dod03g2187 701 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Dod03g2187 701 SUPERFAMILY Hairpin loop containing domain-like 352 411 - -
Dod03g2187 701 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 4 564 - -
Dod03g2187 701 PIRSF SRK 560 644 IPR024171 GO:0004674
Dod03g2187 701 PIRSF SRK 2 566 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2187 Dod-Chr3 51496402 51499659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2187 430 564 Receptor kinase-like Gene Family AT5G45780 42.657 2.23e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod03g2187 S_locus_glycop 6.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2187 - - gmx:100305421 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2187 03 51496402 51499659 Dod03g2187 03 51496402 51499659 ECH