Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2183 ATGTTTCTTAGGCTTGCAGCATCTGAGTTTGATGATTCTAAAAGCAGTAAGGGGACAATCATTGGTGCTGTTGCTGGTGCTGTTGGTGGTATAGTGGCTATCCTAGCACTTCTCCTATTTGCCTTGATGAGGAGAAGGAGACGTGTCGGAGCAGGAACATCGGTGGAGGGTTCATTGGTGGCATTTGGGTATCGGGATCTGCAAACTGCAACAAAGAACTTCTCAGAGAAATTGGGAGGAGGAGGTTTCGGTTCTGTCTTCAAGGGGACACTGCCTGATTCAAGTGTCATAGCAGTGAAGAAGCTTGAGAGCATTAGCCAAGGTGAGAAGCAGTTCAGGAAAGAAGTGAGCACAATCGGGGCAGTCCAACATGTCAATCTTGTTAGGCTTCGCGGCTTCTGCTCCGAAGGTGCCAGGAAGCTGCTGGTCTATGATTACATGCCAAATGGCTCCTTGGATTCAAGCCTGTTCTTCCCTACATTGGCTGCAAACACAGTGAACCAAGGTGGCAATGTGATTGGCCTTTTGGACCCCAGGTTGGAGGGAAATGCTGAGATTGAGGAGATCACTAGAGTCATCACGATTGCATCTTGGTGTGTCCAAGATGATGAGACTCATAGGCCATCCATGGGTCAGGTGGTTCAAATCCTTGAAGGGGTGTTGGAGGTGGCTTTCCCTCCAGTGCCAAGATCACTACAACTCTTTGTTGACAACCAGGAGAACATAGTTTTCTTCACTGACTCAAGCTCTGCACAGAGTTCACAGGTGAAGAACAATGTCTCAATAGCCTCTCAGCCCAAAAGCAATGTCTCATCTTCAAGCCCAGAAGATTAG 834 0.4808 MFLRLAASEFDDSKSSKGTIIGAVAGAVGGIVAILALLLFALMRRRRRVGAGTSVEGSLVAFGYRDLQTATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRKEVSTIGAVQHVNLVRLRGFCSEGARKLLVYDYMPNGSLDSSLFFPTLAANTVNQGGNVIGLLDPRLEGNAEIEEITRVITIASWCVQDDETHRPSMGQVVQILEGVLEVAFPPVPRSLQLFVDNQENIVFFTDSSSAQSSQVKNNVSIASQPKSNVSSSSPED* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2183 277 SMART tyrkin_6 72 217 IPR020635 GO:0004713|GO:0006468
Dod03g2183 277 SUPERFAMILY Protein kinase-like (PK-like) 53 157 IPR011009 -
Dod03g2183 277 PANTHER - 1 157 - -
Dod03g2183 277 Gene3D Transferase(Phosphotransferase) domain 1 145 225 - -
Dod03g2183 277 ProSiteProfiles Protein kinase domain profile. 72 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2183 277 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 156 272 - -
Dod03g2183 277 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 157 - -
Dod03g2183 277 MobiDBLite consensus disorder prediction 251 277 - -
Dod03g2183 277 Gene3D Phosphorylase Kinase; domain 1 40 144 - -
Dod03g2183 277 PANTHER - 156 272 - -
Dod03g2183 277 Pfam Protein tyrosine and serine/threonine kinase 74 156 IPR001245 GO:0004672|GO:0006468
Dod03g2183 277 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2183 Dod-Chr3 51456090 51457298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2183 14 157 Receptor kinase-like Gene Family AT1G56120 44.371 1.26e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod03g2183 PK_Tyr_Ser-Thr 1.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2183 - - pvu:PHAVU_011G109100g 228.409