Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2175 ATGGAGTTTGACCTTGAAAACCCTCTTGGGAACATCCATGATCTTCCCTCTGTTGATGCTGTCTCTTCCCTCTTCCTCATTGAATCTGAACCCACCCTATCACAAAGTTACCTTCAGGCTCTCAAAGACAGAGACTTTGACATCTCCGTTAGAAGAGAAGTCATCGCTTTAATCTCACAGTTTTCATGCACTCTGGATCCAGTTATACCTTACCTTGCTATCAACTATCTAGACCGGTTCCTGGCCAACCAGGGAATATTGCAACCAAAGCCATGGGCCCTTCAGCTCCTTTCAATTTCTTCCATTTCTTTAGCTTCCAAGATGATGAGGACAGAGTACTCTGCCACTAATATCCAGGCCCTTCTGGAAGAGAATGATGGGGGCATCATTTTCGAGGCACAAACAGTACAAAGAATGGAAGGCCTCATCTTGGGAGCTCTACAGTGGAGAATGCGCTCCATCACCCCTTTCTCTTTCATAACTTTCTTCTTTACTTTGTTCAAGCTGAAAGACCCACCAATGGAACAGGTTCTGAAAGAAAGATCATATGAAATTATATTCAAGTCACAACGAGAGATAAAACTTTTGGAATTCAAGCCATCGATAATTGCCGCATCGGCACTTTTAAGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCGGCGCTTCTTAACAGCAATATCCGATTGCTCATATGTAAATAAAGAAAGCATGCTGCAGTGCTATAATGTAATGCAAGATAGAGTGGGCATAGAGGAGGAGGAGTACGAGTCTCTGATCAATGCGGTTTCAAGTTCAGGCACGCCAGCGAATGTGTTGGACCATCATTTTCTGAGCTTTGAAAGTGAAAAAACCAACGGAATCACCGTTGCCGCCTCAACTCTGAGACAAGAGAAAGACCTCAAGAGAAGAAAAATCAATGATTATGGTAACAATCAAACGGTCCAGGTTCCTCGGATTACCCGATTCTGA 972 0.4321 MEFDLENPLGNIHDLPSVDAVSSLFLIESEPTLSQSYLQALKDRDFDISVRREVIALISQFSCTLDPVIPYLAINYLDRFLANQGILQPKPWALQLLSISSISLASKMMRTEYSATNIQALLEENDGGIIFEAQTVQRMEGLILGALQWRMRSITPFSFITFFFTLFKLKDPPMEQVLKERSYEIIFKSQREIKLLEFKPSIIAASALLSASHELFPFQYRRFLTAISDCSYVNKESMLQCYNVMQDRVGIEEEEYESLINAVSSSGTPANVLDHHFLSFESEKTNGITVAASTLRQEKDLKRRKINDYGNNQTVQVPRITRF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2175 323 Pfam Cyclin, N-terminal domain 33 151 IPR006671 -
Dod03g2175 323 Gene3D - 24 243 - -
Dod03g2175 323 SUPERFAMILY Cyclin-like 135 264 IPR036915 -
Dod03g2175 323 SUPERFAMILY Cyclin-like 17 151 IPR036915 -
Dod03g2175 323 Pfam Cyclin, C-terminal domain 154 257 IPR004367 -
Dod03g2175 323 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 310 - -
Dod03g2175 323 SMART cyclin_7 52 145 IPR013763 -
Dod03g2175 323 SMART cyclin_7 158 247 IPR013763 -
Dod03g2175 323 PANTHER CYCLINS 5 310 IPR039361 -
Dod03g2175 323 Gene3D - 34 152 - -
Dod03g2175 323 SMART Cyclin_C_2 154 269 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2175 Dod-Chr3 51171539 51173763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2175 1 303 Core Cell Cycle Gene Families AT4G03270 41.270 1.17e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2175 K18812 - gmx:100799951 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2175 03 51171539 51173763 Dod03g2175 03 51171539 51173763 ECH
Dod10g1321 10 33175642 33178081 Dod03g2175 03 51171539 51173763 PCT