Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2158 ATGAAGAATCCAAAAAAGGATCATGAGGAACCTAAAAGACGGAGCGATTCAATTTCTATTCCTATGAACTCTATATGTCCTCTTGAGAATGACACCATTCTTGTAGACAATTGTGACTCTTCACCAAATGAAATTAGAAATGTTGCAGGGACAAATGGCACTGTCAATTGTGAACTGGACAGCCATTTTCAGAAAAATCAAGGCGCAAGTCGGAGCGAAAGGTTGGACAAGCTTTCTTATGTAAATGGAGGAAAGAGGAATGATTGGTTGGATGACAAAAATGCGGTCAGAAATGACCACTTAATGAGGACCAGGAAGTTGGGGATGTGCTACAATTCTTATCTAACGACTCATGATCATGCAGCAAATCGAGCAAACAACTCTAGATTTTTGCAGTTCCATAATGTTCTTTGTGGCAATGTGAAAGGCTTTGTTACAAGATTATCCTCATTTCTACGTTCACACATTCCTGGAGTCATAAACCCTCATGGTGAAGCTGTGCAGCAGTGGAACAGATTCTTTATCATTGCTTGTTTGGTGGCAATTTTTGTAGACCCCTTGTTTTTTTTCTTGCTGTCAGCAGATGAGGATCTTAACTGCATAGACATTAAGTTGGCCAATAGTTCCACTACACAAGCAATTATAACTTTTAGAAGCATGACCGATGTTGTTTACCTCGTGCATATACTTCTCCAGTTTAGGTTGGCTTTTGTGGCTCCTGAGTCTAGAGTGGTAGGTGCTGGAGAAGTGGTTGAACATCCAAAGAAAATTGCACTCAACTACCTTAGAGGATACTTTCTGATTGATATATTTAATGTGATTCCACTTCCTCAGGCAACTGGAGCTAACTATGCAAAGAATATGTTACGAGCTTCTATTCTTGTTCAATACCTTCCCAGACTATGCCGGTTTCTTACTCTACTTGCTGGGAAGACTCCAAGTGGCTTCATTTTTGAGTCAGCATGGGCGAATTTCGTTATCAATCTTCTCATCTTCATGTTGTCTGCCCATGTTGTTGGTTCATGCTGGTATCTCTTTGGTTTACAGAGAGTTAACCAATGCCTTAGAGATGCCTGCCATGCCTCTAAGTTACCGGGATGCATGAAGTTCATAGATTGTGGGTACAAAAATAGTTTCTCTTCAGATCCAATGTGGCTCATCTGGGCAGCAAATAAGTACTCTGAAGCTTGCTTTGACAAAGATGGTTTCCCTTATGGAATCTATGTTCAAGCTGTTGAACTTACCACAAAAAATTTTATCCGCAAATATGTTTATTCATTGTTCTGGGGATTACAGCAAATCAGCACCCTCGCTGGAAATCAAGTTCCGAGCTACTTCATATGGGAGGTTCTTTTCACCATGGCTATCATTGGGCTAGGCCTATTACTTTTTGCTCTCCTCATCGGAAATATGCAGAACTTTCTTCAGGCTCTTGGACAGAGGAGATTAGAAATGTCATTAAGACAACGAGATTATGAACGGTGGATGAACCATCGTTGCCTTGCCGGAAGAACTAAGAAGGTAATGAGGAGCGCTGAACGGTATAACTGGGTTGCCACTAGAGGAGTAAACGAGGAACTGCTTTTGGAGAAACTGCCTGAAGAACTTCAAAGAGATATAAGAAGTCATTTCTTCAAATTCGTGAACAAAGTTCGGATTTTTTCCATGATGGATGATCAGGTCATAGATGCCATTTGCGAAAGGCTAAAGCTGAAGATATTCATTGAAGAAAGCAAAATTCTATACCCTGGTAGTCCAATTGAGAAGATGATTTTCATTATACGTGGAAAACTGGAGAGCATTGAGGACAAAACTACGGTTTCCTTATCTGGAGGAGATGTTTGTGGCGAGGAACTTCTCACATGGTGCTTAGAAAAGTATTCAGTGAACAGAACTGCAGATGGCAGAAAAGTAAGGATTGCTGATCAGAGACAGCTCAGCAACAGAACTGTTAGATGCTTAACTAATGTAGAAGCATTTGCACTGCAACTTGCGGATCTTGAAGAGGTCACTAGTCTTTTTGCAAGATTTTTGCGAAATCAACGTGTTCAAGGAGCTATCAGGTACGAATCCCCCTACTGGAGGGCCTTTGCAGCAAAACGCATTCAAGTAGCATGGAGATACTGGAAGAGACGTCAAACGCGTGAACATTCATCCCCTGAGTCAAACCATTGA 2175 0.4115 MKNPKKDHEEPKRRSDSISIPMNSICPLENDTILVDNCDSSPNEIRNVAGTNGTVNCELDSHFQKNQGASRSERLDKLSYVNGGKRNDWLDDKNAVRNDHLMRTRKLGMCYNSYLTTHDHAANRANNSRFLQFHNVLCGNVKGFVTRLSSFLRSHIPGVINPHGEAVQQWNRFFIIACLVAIFVDPLFFFLLSADEDLNCIDIKLANSSTTQAIITFRSMTDVVYLVHILLQFRLAFVAPESRVVGAGEVVEHPKKIALNYLRGYFLIDIFNVIPLPQATGANYAKNMLRASILVQYLPRLCRFLTLLAGKTPSGFIFESAWANFVINLLIFMLSAHVVGSCWYLFGLQRVNQCLRDACHASKLPGCMKFIDCGYKNSFSSDPMWLIWAANKYSEACFDKDGFPYGIYVQAVELTTKNFIRKYVYSLFWGLQQISTLAGNQVPSYFIWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGQRRLEMSLRQRDYERWMNHRCLAGRTKKVMRSAERYNWVATRGVNEELLLEKLPEELQRDIRSHFFKFVNKVRIFSMMDDQVIDAICERLKLKIFIEESKILYPGSPIEKMIFIIRGKLESIEDKTTVSLSGGDVCGEELLTWCLEKYSVNRTADGRKVRIADQRQLSNRTVRCLTNVEAFALQLADLEEVTSLFARFLRNQRVQGAIRYESPYWRAFAAKRIQVAWRYWKRRQTREHSSPESNH* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2158 724 CDD CAP_ED 553 670 IPR000595 -
Dod03g2158 724 Pfam Ion transport protein 170 481 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod03g2158 724 SUPERFAMILY cAMP-binding domain-like 481 677 IPR018490 -
Dod03g2158 724 Gene3D Helix hairpin bin 475 545 - -
Dod03g2158 724 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 10 717 - -
Dod03g2158 724 Gene3D Jelly Rolls 551 676 IPR014710 -
Dod03g2158 724 MobiDBLite consensus disorder prediction 1 16 - -
Dod03g2158 724 MobiDBLite consensus disorder prediction 1 22 - -
Dod03g2158 724 Gene3D - 173 474 - -
Dod03g2158 724 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 10 717 - -
Dod03g2158 724 ProSiteProfiles cAMP/cGMP binding motif profile. 553 633 IPR000595 -
Dod03g2158 724 SUPERFAMILY Voltage-gated potassium channels 162 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2158 Dod-Chr3 50916423 50931586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2158 91 630 Ion Channels AT3G17700 57.194 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2158 K05391 - jre:109012085 852.432