Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod03g2147 | ATGGGGTGTTGTGTCTCGACAAGCAATAAGAGTACTTGCAGCAACAGGAGCAATGGGGACATGACCTCTCCTTCTTGCTTAGAAATTGCATTTAGCCGGCAAAAAGAGCAAGGAGAACCTTTTCTGATCATGTTATTTCTCAGCACCATTTGCCATCTTTACCAAGCAGGATTTTCCCTAATGGAAAGAGCCGCACTTCTTGCATATTTACGCAGCACAACCTTAAGGGATTTCATGTATGAAGATATGACCTTTTGTGATGTCTTTGATGGCCATGGTCCACATGGTCATCTTGTTGCGCGCAAAGTGAGAGATGTGTTGCCTTTAAAACTGCTCTCATTTCTGCATTCTGCTAAAGCTCGCATCAAGGGGAACATAGAACCTGAAAATGGAGAGTCTCTGAAGGATTTTTCTGCTAAGGATAAACTGAATTCTACATGGAGAGAAGCTTTCTTGAAGGCATACAAGACTATGGACAAAGAGCTCAGGTCTCATCCAAATTTGGACTACTTCTACAGTGGAAGCACAGCTGTCACTATAGTGAAGCAAGTTGTTGTGTTGTGCAAGGGAAGGGTGTTTGCCTTGCAAGATGAGCCAGAAGTGCCTAGAGTATGGTTGCCTTTCGACGATACATTAGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAAGAGTATGGTGTGATTTCCATACCTGAATTTTCTCATTGGCTGCTTTCTGACAGAGATCAGTTCATTGTTCTTGCCTCAGATGGGGTCTGGGATATTTTAAGCAATGAAGAGGTGGTTGAGATAGTATCTTCGACATCATCACGATCATCAGTAGCGAGGATTCTGGTAGATGCTGCCCCTCAGGGAGTGGAAACTCAAATTCCCTACTTCAAAGATGGATGA | 900 | 0.4333 | MGCCVSTSNKSTCSNRSNGDMTSPSCLEIAFSRQKEQGEPFLIMLFLSTICHLYQAGFSLMERAALLAYLRSTTLRDFMYEDMTFCDVFDGHGPHGHLVARKVRDVLPLKLLSFLHSAKARIKGNIEPENGESLKDFSAKDKLNSTWREAFLKAYKTMDKELRSHPNLDYFYSGSTAVTIVKQVVVLCKGRVFALQDEPEVPRVWLPFDDTLGLAMARAFGDFCLKEYGVISIPEFSHWLLSDRDQFIVLASDGVWDILSNEEVVEIVSSTSSRSSVARILVDAAPQGVETQIPYFKDG* | 300 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod03g2147 | 299 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Dod03g2147 | 299 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 1 | 184 | - | - | |
| Dod03g2147 | 299 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 187 | 294 | - | - | |
| Dod03g2147 | 299 | ProSiteProfiles | PPM-type phosphatase domain profile. | 64 | 299 | IPR001932 | - | |
| Dod03g2147 | 299 | Gene3D | - | 185 | 291 | IPR036457 | - | |
| Dod03g2147 | 299 | Pfam | Protein phosphatase 2C | 214 | 285 | IPR001932 | - | |
| Dod03g2147 | 299 | Gene3D | - | 66 | 184 | IPR036457 | - | |
| Dod03g2147 | 299 | CDD | PP2Cc | 76 | 285 | IPR001932 | - | |
| Dod03g2147 | 299 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 184 | - | - | |
| Dod03g2147 | 299 | PANTHER | ALPHABET, ISOFORM E-RELATED | 187 | 294 | - | - | |
| Dod03g2147 | 299 | SMART | PP2C_4 | 58 | 286 | IPR001932 | - | |
| Dod03g2147 | 299 | SUPERFAMILY | PP2C-like | 80 | 287 | IPR036457 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod03g2147 | Dod-Chr3 | 50673349 | 50675946 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod03g2147 | 1 | 297 | PP2C-type Phosphatase Gene Family | AT1G03590 | 48.555 | 3.45e-90 | 274 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod03g2147 | - | - | adu:107477895 | 349.747 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod03g2147 | 03 | 50673349 | 50675946 | Dod03g2147 | 03 | 50673349 | 50675946 | ECH | |
| Dod10g1286 | 10 | 32751221 | 32755940 | Dod03g2147 | 03 | 50673349 | 50675946 | PCT |