Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2137 ATGGCCGCTGAAAAGAACAGTGACAAATCCAGTAAGGGTGTTGTTGATGACACTCAAAGGGTTATTGCTGAAAGTGGAAGCCAAGATTGGGAGAAGATTAAAGGAAAAGGTGTTGATCTCAGCTCACAGAGGCGGCAATGGAAGCCAGTTTTTGATGAAGCATCCATGCCAAGCAGGCCTCTCAAGAAGATCCGTAGCCCTGAACGCCAGAACCCAATTCAAGCATCATCGTCCCCTAATATGCTTTCTCTACAACCTCCTACTCCTTCTTCTTTTCCTCCTTCGTCTTCACCCTCTTATTCTCCAAGAATAGTGTTTCCTTTTGCTTTTGAAGGGTCTCATACTCAGCAGCCTCCAATGCAATTCCCACACCAATTTGGCACCACAAACTTGCCTCCTTTTCATCCTCCACCTATTCAGCCAACACAACAATTTCAGCAGAATATGATATCTTTTGGGTCCCAACAGAATATGGGGTACCCACAACAACAGCAACAGCACCAACAGCTTCAGAATCAGCAGCTTCTTCAGTATTGGAGTGATACACTGAATCTAAGTCCAAGAGGGAGGATGATGATGATGAACAGAATGGGGCCTGATGGAAGGCCAATGGTAAGGCCCCCAGTACAGCCTTTGAATGCTACCAAGCTCTATAGAGGAGTGAGGCAGCGCCATTGGGGGAAATGGGTTGCCGAGATTCGCCTCCCTCGCAATAGGACTCGCCTCTGGCTAGGCACATTTGACACTGCTGAAGATGCTGCCATGGCCTATGACCGCGAGGCTTTCAAGCTGAGAGGGGAGAACGCTAGGCTCAATTTCCCTGAGCTCTTCCTTAACAAGGAAAAAACACCATCATCAACAACAATAGCACCTGCTTCTGCTTCTGCTTCTACTCCTCATGACGGTTCAGCATCAACCTCAAGCCAGAACACAAAGGAACCGGAGCCAATTCCAGAAGACAGCAGTATGCAGCAGGCTTTGAACAATGACAGCACGCCGATGCCGCCGTCGGCTTTACTAGCCGAGGAGAATGCTGATAATGATTCAGGGATGAGTGATGAAGTTCAGGCAGCTGCTGCAGGTGCTGAAACTGGGGAAGGCGTTACACAGTCTCAGGAATTGCTTTGGGGAGAAATGGCTGCATGGTTCAATGCAATTCCTGCAGGTTGGGGACCTGGTAGCCCTGTGTGGGATGATTTGGACACCAACAACAATCTTCTTTTCCAGTCACACCTTCCTTTTGTGAATCCAAATCAGCAAGAATCCAATGATGCTGATCCTCAGAGAGAAGAAGATAACACAGGACCAGGTTCTTCCTCTTCCTCTTGTCCTATTAGGCCCTTCTTCTGGAAGGATCAAGATTGA 1365 0.4813 MAAEKNSDKSSKGVVDDTQRVIAESGSQDWEKIKGKGVDLSSQRRQWKPVFDEASMPSRPLKKIRSPERQNPIQASSSPNMLSLQPPTPSSFPPSSSPSYSPRIVFPFAFEGSHTQQPPMQFPHQFGTTNLPPFHPPPIQPTQQFQQNMISFGSQQNMGYPQQQQQHQQLQNQQLLQYWSDTLNLSPRGRMMMMNRMGPDGRPMVRPPVQPLNATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKEKTPSSTTIAPASASASTPHDGSASTSSQNTKEPEPIPEDSSMQQALNNDSTPMPPSALLAEENADNDSGMSDEVQAAAAGAETGEGVTQSQELLWGEMAAWFNAIPAGWGPGSPVWDDLDTNNNLLFQSHLPFVNPNQQESNDADPQREEDNTGPGSSSSSCPIRPFFWKDQD* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2137 454 MobiDBLite consensus disorder prediction 1 15 - -
Dod03g2137 454 Gene3D AP2/ERF domain 217 275 IPR036955 GO:0003700|GO:0006355
Dod03g2137 454 PRINTS Ethylene responsive element binding protein signature 240 256 IPR001471 GO:0003700|GO:0006355
Dod03g2137 454 PRINTS Ethylene responsive element binding protein signature 218 229 IPR001471 GO:0003700|GO:0006355
Dod03g2137 454 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 451 - -
Dod03g2137 454 MobiDBLite consensus disorder prediction 282 335 - -
Dod03g2137 454 Pfam AP2 domain 218 266 IPR001471 GO:0003700|GO:0006355
Dod03g2137 454 CDD AP2 216 276 IPR001471 GO:0003700|GO:0006355
Dod03g2137 454 MobiDBLite consensus disorder prediction 27 41 - -
Dod03g2137 454 MobiDBLite consensus disorder prediction 413 454 - -
Dod03g2137 454 ProSiteProfiles AP2/ERF domain profile. 217 274 IPR001471 GO:0003700|GO:0006355
Dod03g2137 454 MobiDBLite consensus disorder prediction 69 85 - -
Dod03g2137 454 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 451 - -
Dod03g2137 454 MobiDBLite consensus disorder prediction 1 98 - -
Dod03g2137 454 MobiDBLite consensus disorder prediction 282 351 - -
Dod03g2137 454 SMART rav1_2 217 280 IPR001471 GO:0003700|GO:0006355
Dod03g2137 454 MobiDBLite consensus disorder prediction 432 446 - -
Dod03g2137 454 SUPERFAMILY DNA-binding domain 217 275 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2137 Dod-Chr3 50461783 50464063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2137 1 399 AP2-EREBP Transcription Factor Family AT2G20880 41.397 1.57e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod03g2137 AP2 3.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2137 - - qsu:111998583 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2137 03 50461783 50464063 Dod03g2137 03 50461783 50464063 ECH