Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2112 ATGGGTTGCATATGTTCAAAGAGTTCAGCCGTAGAAGACAGCAGGGAAAGTATCTCAAACAAACTGTCATCATCTAGTACCAGGCCCTCAGAGCTGAACGTTTTGCGGTTGCATTCGTCGAAAAGGGTTGAGGGGGTTCGGGATAAAGATAAGCTGTTAGATGGTAGTGATGTGAAGGTTTCATTAATTGACAAGAAATCCAATGGTTCGGTTCAGTTACATGATGATGAAAATGGGAAGAATAAAATTGTGAAGCCCGAATTGACTGTTATTGATCATCCTGGTATCGGAAGGGTTCCAAAGGCGACAGAGGGAGAGCAAGTTTCAGCAGGATGGCCGGGTTGGCTTTCTTCTGTTGCCGGTGAAGCTATCAAGGGATGGATACCGCGGAGCGCAAATACTTTTGAAAGGTTACACAAAATTGGGCAAGGAACTTACAGTACTGTCTATAAGGCATGTGATTTGACTAATCAAAAGATTGTTGCCTTGAAGAGGGTGCGTTTTGACAATCTTGATCCCGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTGTTCTGCGTAGGCTCAACCATCCGAACATAATAAAGCTGGAGAGCTTGATAACGTCTCAGACATCCCGTAGCTTGTACCTTGTCTTTGAGTATATGGAACATGATCTTACAGGACTTGCATCAAATCCAGCCATTAAATTTTCTGAACCACAGCTGAAATGCTACATGCAGCAACTTCTCAGTGGATTGGATCATTGTCATAGTCATGGTGTCCTCCATCGTGATATAAAGGGCTCAAATCTTCTCATTGACAACAATGGTGTCTTAAAGATTGCGGATTTTGGCTTGGCAAGTTTTTTTGATCCCCATCATAGTGTTCCATTAACAAGCCGCGTCGTAACTCTATGGTATAGACCACCAGAACTTTTACTCGGAGCAAATCACTATGGAGTTGCAGTTGATTTGTGGAGCACTGGTTGCATACTGGGAGAACTATATACTGGCAGGCCCATGTTGCCAGGAAAAACCGAGGTTGAGCAGTTGCATCGGATTTTTAAACTTTGTGGCTCACCATCTGAGGATTATTGGCTTAAATTGCGGTTGCCACATTCAACAGTATTCAGGCCTCCACACCATTACAGGCGATGTATTGCAGACACATTCAAGGATATTCCACGTGCTGCTGTGAAGCTTATAGAGACCCTACTATCTGTAGATCCATCACATCGAGAGACAGCAGCTGCTGCTCTCAAAAGTGACTTCTTTACATCAGAACCCCTGGCTTGTGATCCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAAATTGACGCTAAATTGCGGGATGAAGCAACCAGAAGGCAAGGAGCTGTTGGAGGTAGGGAGGAAAAGGTTGACTCGGTAGTTAGACAAGGAAAAGTACCTAGGACACATGTGACAGCAAAAGACAATGCTGACCCGGGCATATCAATGCAGCAAGGGCCACGTTATTCCATTTCAAAGAACCGGAGTGAGTTGTCCAACCCTCCTAGAGAACCTGTGTCTGGGGTTCTGGTTTTTCCGCAGAAGCAGCCAGAAGATGTTAAAGGAATGGGAAATTTATCTGGACAGCTTTATAAGAGGCCTTCGCATTCGGGTCCATTGGTTGCTGGTTCTGGCTGGGCAAGGGGTGGGAAGGAAGTTGATGGTGGGTTTCCTGTTTCCAACAGAGTGAACCTTTCAAAGCTATCCGGGCTAGTGGCGTCTAGAACTCAGGGATCTGAAGATCAGGTGGGGAAAGCAGTTCATTTGCACCACAGAAAACCACTTGAAGTAAGAAAATCCGCGGAGGTAACTAATGGATCAGAGTCACGGAGAAGGCAGGATCAAAAACGGATTGTTGATAACCAAATCGAACATAGAAGGGACCCAACTGAGAAGTCAACTCCAGATGGGCATGGATCCCGGGGAAACAAGATATATCTCTCAGGTCCATTAATGGCTTCATCAAACAATATGGATCAGATGCTCAAAGAGCATGATCGGAAGATCCAGGAGTTTTCGAGACGAGCAAGAATCGACAAGTCAAGAGCTAGAGCTGAGAGAGTTCGTGCACAGCGAAAGTAG 2097 0.4516 MGCICSKSSAVEDSRESISNKLSSSSTRPSELNVLRLHSSKRVEGVRDKDKLLDGSDVKVSLIDKKSNGSVQLHDDENGKNKIVKPELTVIDHPGIGRVPKATEGEQVSAGWPGWLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSTVYKACDLTNQKIVALKRVRFDNLDPESVKFMAREILVLRRLNHPNIIKLESLITSQTSRSLYLVFEYMEHDLTGLASNPAIKFSEPQLKCYMQQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPMLPGKTEVEQLHRIFKLCGSPSEDYWLKLRLPHSTVFRPPHHYRRCIADTFKDIPRAAVKLIETLLSVDPSHRETAAAALKSDFFTSEPLACDPSSLPKYPPSKEIDAKLRDEATRRQGAVGGREEKVDSVVRQGKVPRTHVTAKDNADPGISMQQGPRYSISKNRSELSNPPREPVSGVLVFPQKQPEDVKGMGNLSGQLYKRPSHSGPLVAGSGWARGGKEVDGGFPVSNRVNLSKLSGLVASRTQGSEDQVGKAVHLHHRKPLEVRKSAEVTNGSESRRRQDQKRIVDNQIEHRRDPTEKSTPDGHGSRGNKIYLSGPLMASSNNMDQMLKEHDRKIQEFSRRARIDKSRARAERVRAQRK* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2112 698 MobiDBLite consensus disorder prediction 597 698 - -
Dod03g2112 698 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2112 698 PANTHER CYCLIN-DEPENDENT KINASE 1 685 - -
Dod03g2112 698 MobiDBLite consensus disorder prediction 597 643 - -
Dod03g2112 698 Pfam Protein kinase domain 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2112 698 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2112 698 Gene3D Transferase(Phosphotransferase) domain 1 218 456 - -
Dod03g2112 698 SUPERFAMILY Protein kinase-like (PK-like) 128 425 IPR011009 -
Dod03g2112 698 Gene3D Phosphorylase Kinase; domain 1 122 217 - -
Dod03g2112 698 PANTHER CELL DIVISION PROTEIN KINASE 1 685 - -
Dod03g2112 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Dod03g2112 698 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Dod03g2112 698 CDD STKc_CDK9_like 135 419 - -
Dod03g2112 698 MobiDBLite consensus disorder prediction 665 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2112 Dod-Chr3 49988163 49995154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2112 127 484 Core Cell Cycle Gene Families AT5G10270 44.920 4.89e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod03g2112 Pkinase 6.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2112 - - gmx:100807590 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1257 10 32432358 32437287 Dod03g2112 03 49988163 49995154 PCT