Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2109 ATGATCAATTACCTCTTCCTCTCAAACCTCTTGCTCTTGAGCCTTGTTTCATGCACAGAGTTTGTCTACAACACCAACTTCAACTCCACCAACATTGATCTCCATGGAAACGCCACCATTGAGTCGTCCATTCTCACCCTCACCAACATGTCCTTTTTCTCTATAGGCCGTGCTTTCTACCCTTCTAAGATCCCCACAAAAGATGCAAACTCTTCCACCCCTTTATCATTCTCAACCTCCTTCATTTTCTCCATTGCACCATTCGAGGACATCCTCCCTGGCCATGGTTTTGTCTTCATATTCACACCCTCTCCAGGCACAACTGGGGTGGATTCAGCTCAGCATCTTGGTCTCTTCAACTTGACAAACAATGGTAATCCCAATAACCATGTCTTTGGCGTTGAGTTTGATGTGTTCAAGAACCAAGAGTTCAATGACACCGATGATAACCATGTTGGTGTGGACGTGAACTCCCTTGCCTCTTTAACTTCACATACAGCCGGCTTTTGGGGTGGCAAAGATGATGACAAGTTTGAGGACTTGAAGCTTAATGATGGTGAGAACTATCAGGTTTGGATTGACTATTTAGGCTCTAGAGTTAATGTCACAATGGCCCTTGCAGGCCGGAAAAGGCCTAATAGGCCTTTGATAAGTGAGCATGTGAATCTTTCAGATGTTCTTTTGGATGAAATGTTTGTGGGGTTTTGTGGGGCAACAGGGCAACTTGTAGAGAGTCATAAAATTTTGGCCTGGAGCTTCAGTAACTCGAATTTTTCCATTGGTGACGCTTTGGTAACTATGAATTTGCCTTCATTTGTGCTTCCTGAAGAATCGATTTTGAGGTCAGGAGGTTTTATTGCAGGGATCACTACAGGTGCTGTCTTTGTGATTGGCAGTGTTATTGTGATATATGTGCTTTTGTTAAGAAGGAAAAAGAGAAAAAGGAAGGAGGAAGAGGATGACATTGAAGATTGGGAATTAGAGTATTGGCCACACCGTGTTGGTTATGAAGATATTTATGCTGCAACTAGAGGATTTTCAGATCAGAATGTGATTGGGTTTGGAGGGAATGGGAAAGTCTACAAAGGGCATCTTCAAGGAGTAGAAGTTGCAGTGAAAAGGATTGCATATGACAGCGAATATGGCATGAGGGGGTTTTTGTCTGAGATTTCGAGTTTAGGAAGGCTGAAGCATAGGAATGTGGTTCCATTGAGAGGGTGGTGCAAGAAAGAGAGGGGAAGCTTGATCTTAATTTATGATTATATGGAAAATGGAAGCTTAGACAAGAGAATATTTTATGCTGATGAGAGCTCTATTTTCCTGTGGAAGGACAGAATCAAGGTGCTGAAGGATGTGGCTAAGGGAATACTGTATTTGCATGAGAGTTGGGAGGTTAAGGTATTGCATAGGGACATCAAGGCAAGCAATGTGTTACTTGACAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTTGCCAGGATGCATCATCATGAGCAGATTGCTAACACCTCAAGTGTGATCGGAACTGTTGGTTACATGGCACCTGAGCTGCTAAGAACCGGGAGGGCCTCAACTGCAAACCGATGTGTTCAGTTTCGGAGTGTTGGTTTTGGAGGTGGTGTGTGGGAGGAGACCAGCTGA 1644 0.4373 MINYLFLSNLLLLSLVSCTEFVYNTNFNSTNIDLHGNATIESSILTLTNMSFFSIGRAFYPSKIPTKDANSSTPLSFSTSFIFSIAPFEDILPGHGFVFIFTPSPGTTGVDSAQHLGLFNLTNNGNPNNHVFGVEFDVFKNQEFNDTDDNHVGVDVNSLASLTSHTAGFWGGKDDDKFEDLKLNDGENYQVWIDYLGSRVNVTMALAGRKRPNRPLISEHVNLSDVLLDEMFVGFCGATGQLVESHKILAWSFSNSNFSIGDALVTMNLPSFVLPEESILRSGGFIAGITTGAVFVIGSVIVIYVLLLRRKKRKRKEEEDDIEDWELEYWPHRVGYEDIYAATRGFSDQNVIGFGGNGKVYKGHLQGVEVAVKRIAYDSEYGMRGFLSEISSLGRLKHRNVVPLRGWCKKERGSLILIYDYMENGSLDKRIFYADESSIFLWKDRIKVLKDVAKGILYLHESWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHHHEQIANTSSVIGTVGYMAPELLRTGRASTANRCVQFRSVGFGGGVWEETS* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2109 547 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 18 528 - -
Dod03g2109 547 PANTHER - 18 528 - -
Dod03g2109 547 SMART serkin_6 346 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2109 547 CDD lectin_legume_LecRK_Arcelin_ConA 19 256 IPR001220 GO:0030246
Dod03g2109 547 SUPERFAMILY Protein kinase-like (PK-like) 326 526 IPR011009 -
Dod03g2109 547 Gene3D Transferase(Phosphotransferase) domain 1 422 528 - -
Dod03g2109 547 Pfam Protein kinase domain 347 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2109 547 Gene3D - 17 265 - -
Dod03g2109 547 SUPERFAMILY Concanavalin A-like lectins/glucanases 10 256 IPR013320 -
Dod03g2109 547 Pfam Legume lectin domain 19 257 IPR001220 GO:0030246
Dod03g2109 547 Gene3D Phosphorylase Kinase; domain 1 307 421 - -
Dod03g2109 547 ProSiteProfiles Protein kinase domain profile. 346 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2109 547 Coils Coil 308 328 - -
Dod03g2109 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Dod03g2109 547 ProSitePatterns Protein kinases ATP-binding region signature. 352 373 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2109 Dod-Chr3 49979731 49981374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2109 16 526 Receptor kinase-like Gene Family AT4G04960 61.359 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod03g2109 Lectin_legB 2.3e-64 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2109 - - gmx:100807059 830.091