LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod03g2103	ATGGCTTTGGCGTCATCTTCTTCCTTAACCACTTGTGTGTTGTTCCTCCTTCTTCTGCATTTGTCTTGCTTCTTCAATAGCCTTAATGCAAAGCACAGTGTGACCAATGGTCACAACCACCAACATCACCAGCACAGCCAGAATTCCCCATTGAACCCAAGGCTTTACCGCGCTTTTCTTGCGCTCCAAGCATGGAAGCGTGTGATCTACTCTGACCCAAATAACTTTACTACCGATTGGGTAGGTCCTTCAGTTTGCAACTACACTGGAATCTATTGTGCTCCCTCTCAAGATGACCCTAAGGTGACAGTTGTAGCAGGCATTGACCTTAACCATGCAGACTTAGCTGGCTTCCTACCCAATGAATTAGGCCTGCTCTCAGATCTTGCACTCATACATCTCAACAGCAACCGCTTCTGTGGCGTCATCCCTATGACATTGAGCAACCTTACTCTACTCTATGAGCTTGATCTTAGCAACAACAGATTTGTTGGACCTTTTCCTATGGTTGTGCTTTCCCTTCCTACCCTCAAATATCTTGACATTCGCTTCAACGAATTTGAAGGGCCATTGCCTGCTCAACTCTTCAACAAAACTTTTGATGCTATTTTTCTTAACAACAATCGCTTCACCAATATCATTCCGCGAAATCTTGGCCGTAGCTCGGCTTCTGTCTTGGTCTTTGCTAACAACAAATTTGGAGGTTGTTTGCCAGAAAGCATAGTAAACTTTGCTGATACACTAGAAGAACTTGTCCTAATCAACAGCAGCTTGTCAGGTTGTCTGCCACAGCAAGTTGGATTCCTCTACAAATTGAGACTGTTAGATGTGAGTTTCAACCAAATTGTTGGCCCCATACCTTACAGCCTTGCAGGGTTGTCTCATTTGGAGCAGCTGAATTTGGGTCATAATATGATGAGTGGCATAGTCCCTATGGGAGTTTGTGAGCTGCCAAACTTGGCAAATTTCACATTCTCCTACAACTTCTTTTGTGAGGAAGAGGGGATTTGTCAGAATTTGACATCAAAGAGAATTGCGTTTGATGATCGCCGGAACTGTTTGCCAGACAAGCCATTGCAGAGGAGCAAGAAAGAATGCAATGCCATTAATGAGCACCCAGTTGACTGTGATAAGCTTTGTTGTGCCACATTTGGTTCTGGAAACAATGTCACTACTGGTTCAGTGTTTATCCAACCTGCTGCAATTCCAGCAGCAATGCCTATCTCTGCACCTCTTCTTGCACCTAGCTACCCATGA	1257	0.4447	MALASSSSLTTCVLFLLLLHLSCFFNSLNAKHSVTNGHNHQHHQHSQNSPLNPRLYRAFLALQAWKRVIYSDPNNFTTDWVGPSVCNYTGIYCAPSQDDPKVTVVAGIDLNHADLAGFLPNELGLLSDLALIHLNSNRFCGVIPMTLSNLTLLYELDLSNNRFVGPFPMVVLSLPTLKYLDIRFNEFEGPLPAQLFNKTFDAIFLNNNRFTNIIPRNLGRSSASVLVFANNKFGGCLPESIVNFADTLEELVLINSSLSGCLPQQVGFLYKLRLLDVSFNQIVGPIPYSLAGLSHLEQLNLGHNMMSGIVPMGVCELPNLANFTFSYNFFCEEEGICQNLTSKRIAFDDRRNCLPDKPLQRSKKECNAINEHPVDCDKLCCATFGSGNNVTTGSVFIQPAAIPAAMPISAPLLAPSYP*	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod03g2103	418	Gene3D	Ribonuclease Inhibitor	59	221	IPR032675	-
	Dod03g2103	418	Gene3D	Ribonuclease Inhibitor	222	355	IPR032675	-
	Dod03g2103	418	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	3	417	-	-
	Dod03g2103	418	SUPERFAMILY	L domain-like	59	342	-	-
	Dod03g2103	418	PANTHER	EXTENSIN-LIKE PROTEIN	3	417	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod03g2103	Dod-Chr3	49749959	49751426	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod03g2103	52	394	Leucine-rich Repeat extension Gene Families	AT3G24480	54.227	5.51e-136	397

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod03g2103	-		-	gmx:100782629	654.825