Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2082 ATGAAACGCGTCAAGAGACAGACAGTGACTCGTGTGCACGTTTGCAGCGATCAGAATTCAAACGCCACCTCTCCAACTCCTCCAACTCCCTCTCCTCATGGAACCCCACCGACCACACCCCCTGCCAGTGGCTCGGGGTCACCTGTGACCTTGCCACCACCTCTGTCACATCCCTTATCCTCACCATGGCCGACCTCCACGGCCCCCTCCCTGCCCCCTCACTCTGCCGCCTCCCCTACCTCACCTCCCTCTCCCTCCCCAACAACTTCATCTCCGCCTCAATCCCCCACTCCCTCTCCGCCTGCCGCCGCCTGCCGCCGCCTTCGCTACCTCGACCTCTCCATCAACTTCCTCGAGGGCCCCATTCCTCCCTTCCTGTCCCAATTAACCGCCCTCCAGCATCTCGACCTCTCTTATAATAACCTCACCGGCGGTGTTCCCGCTGCACTCGGCAACCTCCGCAACCTTGAGTCCCTCGTCTTAGCCTACAACTTACTCAACGGAACAATCCCAAGCTCGTTATCCAACATGACATCGCTCAAATTCCTTCATTTGGCCTACAACCCCTTCGAGCCGAGTCCAATCCCGAGTCGACTTGGTGAACTTGTAAACCTCGAGGAGATTTGGCTCACTGGTTGCAACCTCGTTGGTACTATCCCAACTTCGATGGGGAACCTCACGCGCCTCTTGAACCTCAATTTGGCGTGCAACAATCTCGTTGGGAAGATTCCGGAATCATTCGCCGGGTTGAAAAGCGTGACTCAGATCGAGCTTTTTCAGAACTCGCTCACTGGCAAGTTGCCGCTAGGACTGGCGAACCTCACACGCTTGGAGAAGCTTGACGCGTCGTTAAATGGGTTGACTGGGACGATTCCCAAAGGCCTTTGGGAGTTGAAACTCGCGTCGCTGAATTTACATAGTAACAATCTCGAAGGCTTTTTGCCTGCGAGCATTGCTCGATCTTCGAATCTTTATGAGCTTAAACTGTTCAACAACAGCCTCGTCGGGGTGTTGCCTACTGATTTGGGGAGTAACTCGTCTTTGCTGGAAATCAACCTTTCGTATAATCGTTTTTCCGGTGAGATTCCGTATAGTCTGTGCTGGCATGGAAAGTTGCAGAAGCTGCTCTTGGCGGGCAACTATTTCTCTGGGAAAATCCCAGAAAGTCTTGCGAACTGCACCAGCCTAAGGGTGATTAGGCTTAGGAATAATAATCTTTCTGGAATAGTACCTGATGCGATGTGGGCTCTTCCCTATGTGATTTCGCTTGTGCTCGATTATAATTCTCTGACTGGGCCAATTTCGAGTGAGATATCTGGTGCTTGTAGTCTAATTCTATTGTGGATTTCGAATAACAGGTTTGATGGTTCGATTCCTGATGGAATTGGATCGTTGAATAAACTTTCGAGTTTTGTTGGCAGCAATAATAAGTTTTCTGGTGGGATCCCTGATAGTATGGCCAAGTTGACACAGTTGGAGTTACTGGATCTGTGTTGCAATGAACTTTCTGGTGAAATTCCGGGTTGGATTCATGGTTGGACTAAGCTTAATGAGCTTAAATTGGATAATAATAAGTTCGATGGTAGCATTCCAAATGAATTGGGAAGTTTGTCTGTGCTTGATCATCTTGATCTTTCAAGTAACCAACTTTCTGGTGAGATTCCACTAGAGCTGCAGCGTTTGAAGCTCGTTTTTTTAAATTTGTCATACAATAAGCTTTCTGGGGATGTTCCTGGCCGTTATGATAATGGGAATTATAAGATGAGTTTTGTTGGAAATCCTAGACTTCGTGTAAATGTGTCTAGGGTTTCTCATGACTTTGGGGAGAGTAGGCACCGGAGGTATGCGTGGATTTTCGGGTCCTCATTTGTGCTTGTTGGAGCTGTGCTCGTCATCTTTGGGTTGGCATGGTTTTACTTGAAACATAGGAACACCATGAAGATCAAGAAGGGTCTCGATGTTTCAAAGTGGAAATCATTTTATAAGCTTGGCTTCAATGAGCTTGAGGTTGTAAAATTGATGAGCAAAGACAACAAGATAGGGAGCGGAGCATCGGGGAAGGTCTACAAGGTTGTGCTATGCAGTGGTGAGGTTGTGGCAGTGAAGAAATTGTGGGGAACAGCTGAGAAAGGAAATGAAACTAGAACGAGAATTGTTGGTTATGCAAAGGACGAATTTGATGTTGAAGTAGAAGTATTGGGAAAGATCAGGCACAAGAATATTATAAGGTTGTGGAGTTGTTACAAAAGTGGTGATACTAGGCTCCTGGTCTATGAATATATGCCAAATGGGAACTTGGCTGAAATGTTGAAGGGTAGCAATAGAAGCTTGTTGGATTGGCCAACAAGATACAAAATTGCAATTGATGTTGCAGAGGGGCTTGCTTATTTGCATCACGATTGTGTCCCACCCATTGTTCATAGGGACGTAAAATCTAACAATATATTGTTGGACGGAGAGTTTGGAGCCAAAGTTGCAGATTTTGGAGTTGCTAAAATTGTTAGCCAAGGGGCAGAATCCAAGTCTGTAATTGTAGGATCTTATGGTTACCTTGCACCAGAATACGCTTATACACTTCGAGTGAACGAAAAGAGTGATACTTATAGCTTCGGAGTGGTCATTTTGGAGTTAGTAACTGGAAAACCCCCTATTGATGCAGATTATGGGGAAAATGACCTGGTAAAATGGGTTTCCTCCATGTTGGAACAAGAAGGACAGGATTGTGTGATTGATCTTACCCTTGACTCGAAATACAGGGAAGAAATAAGCACAGTGCTTAGTGTGGGGCTTCTTTGCACAAGCACTCTCCCTGTAAACCGCCCTGCAATGAGGAGGGTGGTGAAAATGCTTCAGCAAATAACAACAGTTCCCAGATCCAGAAGTTTAGATTGA 2892 0.4665 MKRVKRQTVTRVHVCSDQNSNATSPTPPTPSPHGTPPTTPPASGSGSPVTLPPPLSHPLSSPWPTSTAPSLPPHSAASPTSPPSPSPTTSSPPQSPTPSPPAAACRRLRYLDLSINFLEGPIPPFLSQLTALQHLDLSYNNLTGGVPAALGNLRNLESLVLAYNLLNGTIPSSLSNMTSLKFLHLAYNPFEPSPIPSRLGELVNLEEIWLTGCNLVGTIPTSMGNLTRLLNLNLACNNLVGKIPESFAGLKSVTQIELFQNSLTGKLPLGLANLTRLEKLDASLNGLTGTIPKGLWELKLASLNLHSNNLEGFLPASIARSSNLYELKLFNNSLVGVLPTDLGSNSSLLEINLSYNRFSGEIPYSLCWHGKLQKLLLAGNYFSGKIPESLANCTSLRVIRLRNNNLSGIVPDAMWALPYVISLVLDYNSLTGPISSEISGACSLILLWISNNRFDGSIPDGIGSLNKLSSFVGSNNKFSGGIPDSMAKLTQLELLDLCCNELSGEIPGWIHGWTKLNELKLDNNKFDGSIPNELGSLSVLDHLDLSSNQLSGEIPLELQRLKLVFLNLSYNKLSGDVPGRYDNGNYKMSFVGNPRLRVNVSRVSHDFGESRHRRYAWIFGSSFVLVGAVLVIFGLAWFYLKHRNTMKIKKGLDVSKWKSFYKLGFNELEVVKLMSKDNKIGSGASGKVYKVVLCSGEVVAVKKLWGTAEKGNETRTRIVGYAKDEFDVEVEVLGKIRHKNIIRLWSCYKSGDTRLLVYEYMPNGNLAEMLKGSNRSLLDWPTRYKIAIDVAEGLAYLHHDCVPPIVHRDVKSNNILLDGEFGAKVADFGVAKIVSQGAESKSVIVGSYGYLAPEYAYTLRVNEKSDTYSFGVVILELVTGKPPIDADYGENDLVKWVSSMLEQEGQDCVIDLTLDSKYREEISTVLSVGLLCTSTLPVNRPAMRRVVKMLQQITTVPRSRSLD* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2082 963 Gene3D Transferase(Phosphotransferase) domain 1 761 960 - -
Dod03g2082 963 Gene3D Phosphorylase Kinase; domain 1 657 760 - -
Dod03g2082 963 Pfam Leucine rich repeat 491 550 IPR001611 GO:0005515
Dod03g2082 963 Pfam Leucine rich repeat 204 263 IPR001611 GO:0005515
Dod03g2082 963 Pfam Leucine rich repeat 106 166 IPR001611 GO:0005515
Dod03g2082 963 Pfam Leucine rich repeat 371 430 IPR001611 GO:0005515
Dod03g2082 963 MobiDBLite consensus disorder prediction 25 100 - -
Dod03g2082 963 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 102 955 - -
Dod03g2082 963 MobiDBLite consensus disorder prediction 1 103 - -
Dod03g2082 963 Pfam Protein kinase domain 676 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2082 963 Gene3D Ribonuclease Inhibitor 195 298 IPR032675 -
Dod03g2082 963 Gene3D Ribonuclease Inhibitor 89 194 IPR032675 -
Dod03g2082 963 SUPERFAMILY RNI-like 103 407 - -
Dod03g2082 963 ProSiteProfiles Protein kinase domain profile. 674 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2082 963 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 102 955 - -
Dod03g2082 963 SMART serkin_6 674 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2082 963 Gene3D Ribonuclease Inhibitor 299 599 IPR032675 -
Dod03g2082 963 SUPERFAMILY RNI-like 322 578 - -
Dod03g2082 963 SUPERFAMILY Protein kinase-like (PK-like) 675 952 IPR011009 -
Dod03g2082 963 ProSitePatterns Protein kinases ATP-binding region signature. 680 703 IPR017441 GO:0005524
Dod03g2082 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Dod03g2082 963 SMART LRR_typ_2 274 298 IPR003591 -
Dod03g2082 963 SMART LRR_typ_2 177 202 IPR003591 -
Dod03g2082 963 SMART LRR_typ_2 129 152 IPR003591 -
Dod03g2082 963 SMART LRR_typ_2 537 561 IPR003591 -
Dod03g2082 963 SMART LRR_typ_2 153 176 IPR003591 -
Dod03g2082 963 SMART LRR_typ_2 393 416 IPR003591 -
Dod03g2082 963 SMART LRR_typ_2 226 249 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2082 Dod-Chr3 49110230 49114149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2082 103 953 Receptor kinase-like Gene Family AT1G28440 56.512 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g2082 Pkinase 9.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2082 - - ccaj:109805711 1029.62