Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2079 ATGGGAACAGCCCAAGGCCTAGAATATCTTCCCCAGCAATGCAATCCTAAGACTATTCATCGGGACGTGAAGGCAGCTAATGTATTATTAGATGGAGATTTTGAGGCAGTTGTGGGTGACTTTGGTTTGGCAAAGTTAGTTGATGTTCGAAAAACTAATGTGAAAACTCAAGTTCGTGAGACAATGGGCCATATAGCTCCTGAATACTTGTCCACTGGAAAATCTTCAGAAAAGACAGATGTTTTTGGTTATGGGGTTATGCTTTTGGAGCTTGTTACTGCTCAACGTGCAATTGACTTGTCACGTTTGGAAGAGGAAGATGTTGTGTCATTGCTTGACCATGTTAAGAAACTACAACGAGAGAAAAAACTAGATACTATTGTCGACTGCAACTTGAATAAAAATTACAACATAGAAGAGGTTGAAAAGATTGTACAAGTTGCATTACTCTGCATGCAACCATCACCAGAGGATCGCACGGCAATGTCAGAAGTTGTAAGAATGCTAGAGGGAGAAGGGTTGGCTAAAAGGTGGGAGGAATGGCAGCATGCGGAGGTCAATCGGAGGCGGGACTACTAG 579 0.4249 MGTAQGLEYLPQQCNPKTIHRDVKAANVLLDGDFEAVVGDFGLAKLVDVRKTNVKTQVRETMGHIAPEYLSTGKSSEKTDVFGYGVMLLELVTAQRAIDLSRLEEEDVVSLLDHVKKLQREKKLDTIVDCNLNKNYNIEEVEKIVQVALLCMQPSPEDRTAMSEVVRMLEGEGLAKRWEEWQHAEVNRRRDY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2079 192 Gene3D Transferase(Phosphotransferase) domain 1 1 189 - -
Dod03g2079 192 Pfam Protein tyrosine and serine/threonine kinase 3 169 IPR001245 GO:0004672|GO:0006468
Dod03g2079 192 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2079 192 SUPERFAMILY Protein kinase-like (PK-like) 2 170 IPR011009 -
Dod03g2079 192 PANTHER LRR RECEPTOR KINASE SERK2 1 192 - -
Dod03g2079 192 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 192 - -
Dod03g2079 192 SMART tyrkin_6 2 169 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2079 Dod-Chr3 48975556 48976604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2079 1 192 Receptor kinase-like Gene Family AT5G10290 78.125 4.03e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod03g2079 PK_Tyr_Ser-Thr 3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2079 - - gmx:100786654 333.954