Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2078 ATGGCAAGCGGTTCACGTAAAACAAAAACTGGCCTAATTGTTGGAATAATTGTAGGTTTAGTGCTTATTATTTTACCTGGTGGTGTACTATACTTCTGGTGCAAGGGTTACAAGCGTGAAGTTTTTGTGGATGTTGCAGGACAGGGAGGCTTTGGAAAGCTTTATAAAGGTGTTCTAAATGGCACAACAGTTGCTGTTAAAAGGTTAACTGATTTTGGAAGGCCTGGAGGAGATGCTGCTTTCCAGCGTGAAATTGAGATGATTAGTGTAGCTGTGCATAGGAACCTGTTACGGCTAATTGGGTTTTGTACTACTCCAATCGAACGCCTTTTAGTTTATCCCTTCATGCATAACTGA 357 0.4118 MASGSRKTKTGLIVGIIVGLVLIILPGGVLYFWCKGYKREVFVDVAGQGGFGKLYKGVLNGTTVAVKRLTDFGRPGGDAAFQREIEMISVAVHRNLLRLIGFCTTPIERLLVYPFMHN* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2078 118 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 45 118 - -
Dod03g2078 118 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 47 - -
Dod03g2078 118 Pfam Protein tyrosine and serine/threonine kinase 45 117 IPR001245 GO:0004672|GO:0006468
Dod03g2078 118 PANTHER LRR RECEPTOR-LIKE KINASE 45 118 - -
Dod03g2078 118 PANTHER LRR RECEPTOR-LIKE KINASE 4 47 - -
Dod03g2078 118 Gene3D Phosphorylase Kinase; domain 1 38 115 - -
Dod03g2078 118 ProSiteProfiles Protein kinase domain profile. 40 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g2078 118 SUPERFAMILY Protein kinase-like (PK-like) 29 118 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2078 Dod-Chr3 48972002 48974865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2078 9 118 Receptor kinase-like Gene Family AT5G65240 56.757 2.06e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod03g2078 PK_Tyr_Ser-Thr 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2078 - - gmx:100793416 149.058