Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2072 ATGCTTGCGTTGTCACCTTTGAGGAGCACAAGAGATGAAAGCCAAGGAGAGATGGAGAGCCTCAGCTCTATGGGCACCTCAAACGACGAATTCGCCGACCTCTCTGAAGGGAGCTTGTTGGAAAGCATCAACTTCGATGACCTCTTCGTTGGCATCAACGTGGACGGTGACCTGTTGCCCGATTTGGAGATGGACGGCGACGTCTTTGCCGAGTTCTCCGCCGGCACGGCTGCTGCCGGCCGAGAGGAATCGGAGATGAGGTCCTCAGTTGAGAACTGCTGCAGCAAAGGTGAGAATTGTCAGAATTATGATGTGGCGGTGAGTGCTCATTCGACGAAGAAGGAGAAGGAAGAGGAAGATAAAAGTGATTCGGGTTCGGGTGGTGATTCGGGACCCAATTCCGGGACAAGTAGAGGGGAGGAGATAGTTAGCAAAAGAGATGAGTCCGTGGTGGTGAATCCTTCGCCAAAGAATGGTGGGAAAGGAAGAAAATCATCATCTCAGTCCAAGAGTAATCCTCAAGGGAAGAAAAAAGTCAAGGTGGATTGGACCCCAGAGTTGCACAGGCGATTCGTGCAAGCAGTGGAACAGCTAGGAGTGGATAAGGCAGTGCCTTCAAGGATTTTGGAGATAATGGGGATTGACTGTCTTACTCGCCATAACATTGCCAGCCATCTTCAAAAATATAGATCCCACAGGAAACATTTGCTAACGCGTGAAGCTGAAGCAGCAAACTGGAGTCAAAGGAGACAAATGTATGGAGTGACAAGCGCAGGAGGAGGAGGGAAGAGAGACGTGAGCCCCTGGCTAACACCCACCATGGGTTTCCCTCCCATCACCCCAATGCACCATTTTAGACCTCTACATGTATGGGGGCATCCCTCCATGGACCAGTCCTTTATGCACATGTGGCCTAAACATATTCCACCTTCACCGCCACCGCCATCACAACCACTACCACTCTCATGGGCACCGCCGGCCGCTCCTCCGCCACCTCCTGACCCTTCATTTTGGCATGCTCAGCACCAACGGGTTCCAAACGCACCAACCCCAGGAACACCTTGCTTTCCACAGGCTCTGACAACAACGAGATTCGGATCACCAACTGTCCCAGGCATCCCACCCCATGCCATGTACAAAGCAGATCCCGGCATTGGCGTCCCCGGCCCCAGGCCTCTCTTTGACTTCCATCCGTCAAAGGAGAGCATAGATGCAGCTATTGGAGATGTTTTATCAAAACCGTGGCTGCCACTGCCTCTTGGACTTCAGGCTCCAGCGCTTGACAGCGTGTTGGGTGAATTACAAAGACAAGGAATTCCAAAAGTTCCCCCCTCTTGTGGTTGA 1344 0.5231 MLALSPLRSTRDESQGEMESLSSMGTSNDEFADLSEGSLLESINFDDLFVGINVDGDLLPDLEMDGDVFAEFSAGTAAAGREESEMRSSVENCCSKGENCQNYDVAVSAHSTKKEKEEEDKSDSGSGGDSGPNSGTSRGEEIVSKRDESVVVNPSPKNGGKGRKSSSQSKSNPQGKKKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLTREAEAANWSQRRQMYGVTSAGGGGKRDVSPWLTPTMGFPPITPMHHFRPLHVWGHPSMDQSFMHMWPKHIPPSPPPPSQPLPLSWAPPAAPPPPPDPSFWHAQHQRVPNAPTPGTPCFPQALTTTRFGSPTVPGIPPHAMYKADPGIGVPGPRPLFDFHPSKESIDAAIGDVLSKPWLPLPLGLQAPALDSVLGELQRQGIPKVPPSCG* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2072 447 MobiDBLite consensus disorder prediction 109 182 - -
Dod03g2072 447 Gene3D - 175 236 - -
Dod03g2072 447 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 178 232 IPR006447 GO:0003677
Dod03g2072 447 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 446 IPR044825 GO:0003700|GO:0045893
Dod03g2072 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 175 234 IPR017930 -
Dod03g2072 447 MobiDBLite consensus disorder prediction 307 335 - -
Dod03g2072 447 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 446 - -
Dod03g2072 447 Pfam Myb-like DNA-binding domain 181 230 IPR001005 -
Dod03g2072 447 MobiDBLite consensus disorder prediction 1 31 - -
Dod03g2072 447 MobiDBLite consensus disorder prediction 8 31 - -
Dod03g2072 447 SUPERFAMILY Homeodomain-like 177 235 IPR009057 -
Dod03g2072 447 MobiDBLite consensus disorder prediction 109 125 - -
Dod03g2072 447 MobiDBLite consensus disorder prediction 159 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2072 Dod-Chr3 48754920 48760582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2072 12 387 G2-like Transcription Factor Family AT5G44190 38.421 1.04e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod03g2072 Myb_DNA-binding 5.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2072 - - gmx:100790591 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2072 03 48754920 48760582 Dod03g2072 03 48754920 48760582 ECH