Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2069 ATGGAGGGTGGTGGTTCAGAAGAAGAGAAGAATAAAGAGAAGCCACTGGAGGTGGAGAACAACAAGACCAAGCGCAAAATGAAAACTGCTTCGCAGTTGGAAGTTCTGGAGAAAACTTATGCTGTGGAGACTTACCCTTCAGAGGCATTGCGGGCTGAACTATCTGTGAAGCTGGGTCTGTCTGATCGTCAACTGCAAATGTGGTTTTGCCATCGGAGACTGAAGGACAGGAAGGCCGTGCCTGGGGGAAAGAAGCTGCGAAATGATTCGCCCCCTTTGGCGCCGGTAGGAGAGGGTGTTGAGCAAATGGCAGTGGCTGATGTTGTGCACGATCATGGTTTTCCTTCTGGACTGAGGCCATTTGGTCATTTGGACTCGAGGCGAGTTGTGCTGCCACGGCCTGGGATGGCCTTTCCTAGGATGGGAACTGGATTGTCTGCAACGGAGAGCAAAAGTTACTATGAAGCACATCAGACCATAGAGGAGCTGCGAGCTGTTGCATTCGTGGAGAGACAGTTGCAGGAGCCATTAAGAGAGGATGGACCAATTCTTGGGATGGAGTTTGATTCCTTGCCGCCGGGGGCATTTGGTGCGCCAATAGGGGCAGCGACAATGGAGCAGCATAGGCAATCTGAAAGGCCTTTTGAGGCGAAAATTTATGAACAGCTGGACAAGGGTGTTTCAAGGACTCTCCATGAGTATCAATTTATTCCAGAGCAGCCAACTGTTAGAAATGAGACTATTGGTAGAGTTGTCCCCTCCAGAAGCTACAGTTCTCTGAATGGCATTTCACATTCAAGGACTTTATTATCTAGCTGCCAATCTTTCCTTGATGGGAAAGAATATACATCATATGGATATGGAGTTAAAGGTCAGACACCCGGTCTGAATCTTTTGTCTCAGCAAGGCAGGCAGAATCATCTTTTGCCTTCTGCTTCAGGAGAGATTGATGGTGTTCCACTGAAGAACCCATTTGTTGATGTAACAGTTGATGTTCATAGTGGGGCTCACCCAATAGCACTAATCGACAGTCAACTAGTGCCATCTGACAAGAGGGTTATCCATGAGGAGGAACTTGCAAGGTTTCAAAGGAAGCGAAAGAGTGATGAGGCTAGAATGCAACGGGAACTTGAAGCACAGGAGAAAAGAATCAGAAAAGAGCTAGAAAAACAGGATATTCTAAGGCGAAAGAGAGAAGAGCAACTAAAGAAAGAGATGGAGAGGAATGACCGTGAAAGGCGGAAGGAAGAAGAAAGGTTATTGCGTGAAAGACAGCGACAGGAGGAGAGGTACCAGAGAGAACAGAGGCGTGAACTGGAGCGGAGGGAGAAGTTTCTACAGAAGGAAACAATAAGAGCTGAGAAACTGAGACAGAAGGAAGAACTGCGCAGGGAGAAGGAGGCAGCAAGGATCAAAGCTGCCAACGAGAGAGCTATTTCCCGCAGAATGGCCAAAGAATCAATGGAACTTATTGAAGATGAACGTCTGGAACTCATGGGGTTAGCTACATTAAAGAAGGGATTATCTTCAATACTGGCCCTTGACTCTGAAACAATGCAAAATCTTGAATCATATGGAGATGGGCGGACTCCATTCCCACCAAAGTCTGTGCAGTTGAAAAGACCATTTTCAATTCAACCCTGGTCAGATTCTGAGGAGAACGTAGGAAATCTTCTCATGGTTTGGAGGTTCTTGAATACTTTTGCTGATGTTTTTGGAATATGGCCATTTACCTTGGATGAACTTATACAAGCTTTCCATGACTATGATCCAAGGTTGTTAGGTGAGATTCATATTGCTCTTTTGAGGTCTATTATGAAAGATATTGAAGATGTTGCAAGAAGAGCCTCAACTGGATTAGGAGCTAACCAAAACAATGTTGCCAATTCTGGTGGGGGGCATCCTCAAGTCGTGGAAGGGGCATATGTGTGGGGTTTTGATATCAGAAACTGGCAACAGCATTTAAATCCATTAACATGGCCAGAGATTTTGCGGCAGTTTGCTTTGTCAGCAGGGTTTGGGCCAAAATTGAAGAAACAGAACATTGAGCCAGTGCATCCATGTGATAACAATGAGGGTAATGATGGTAAAGACATAATCTCTAATCTACGCAGTGGAGCAGCGGTTGAAAATGCTGTTGTTTTCATGCAAGAGAAGGGATTGTCGAACCCTGGAAGATCTAGGCATTGCTTGACACCTGGAACTGTTAAATTTGCTGCATTTCATGTTCTTTCTGTTGAAGGAAGCAATGGCCTCAATATATTGGAAGTTGCAGACAAAATTCAGAAATCTGGACTTCGTGACCTTAGAACAAGCAAAACTCCTGAGGCCTCTATAGGTGCTGCTTTGTCTAGAGAGACAAAGCTATTTGAAAGGATAGCTCCTTCAACATATTGTGTACGTCCAGCATATCGAAAGGACCCTGCTGATGCTGAAGCAATTTTCTCAGCTGCTAGGGATAGAATCAGGGTATTCAAAAGCGGATATGTGGATGCTGGAGAAGTAGATGATGGTGAAAGGGCTGAAGATTCTGAAAGTGATGAGACAGAAGACCCTGAGGCTGATGACTTAGGAGCTGAAACAAATACAAAAACGGTGGGTCCCATTTCTGTGGAATGTAATGCAAACAATGTAATGAGAAGTACAAAGGACAGTGATGAGGTTTGTCAAACTCTTGATGGTTGCCATGGCAATGAGAAAATGAATGAGGATTTAGCTTCAATTAATTCTGAGGGTATCCATGCCCAGAAAGGTGCTAGTGCCTCTAGTGAAATTGCACCTTGCAGAAATGATTTTGCAAATCCTAATTTATCAAGCGTGGATATTGATGAAAGCATTCCTGCTGAACCATGGGTACAAGGGCTGACAGAAGGAGAGTACTCTGATCTTAGTGTTGAAGAGCGTCTTAATGCACTTGTTGCTTTGATTGGAGTGGCAATTGAAGGAAATTCAATTCGTGTTATACTTGAGGAACGTCTAGAAGCTGCAAATGCTTTAAAAAAGCAGATGTGGGCAGAAACACAGCTTGATAAACGTCGTATCAAAGAGGATCACTTTGTCAAGATGCATTCTGTATCTTATTTCAGCAACATAAATGAACCAACTGGTGCATTTCCATCAGTAGAGGATAAACTGAACCCATTGCTTTCTGTTGATGACAAAAATGACAAGGCTTTGCTCACTCCCCATGTCCTTCACAACCAGATAAATGAACTACAGGAAAACCAGAGCCATCTTCAGTGTTCTTTTGAAGTTAACCAGGAGATCCAAGATTATTCTGCTGTTCAATATAATTATTCTTTTCAACAACCAGGATATGCGGCTGAAAAATCAAGGTCAAATATGAAATCATACATTGGTCACTTGGCAGAACAAACCTACATGTGTAGGTCATTGCCTCTTGGTTTGGATCGAAGACATAATCGATACTGGCAATTCATTACATCTGCTTCTCAAAATGATCCAGGCTGTGGCAGGATTTTTGTGGAGTTGCATGATGGTTGTTGGCGGCTGATTGATTCTGAAGTGGGTTTTGATGCGCTATTGGCTTCATTGGATCTTGGTAGAAATGAAGCTGATAACAATGATGCTTTTATGAGATATCAGGACTTCGAGAAATGGATGCAAAATGAATGTCTAAATTCCTCAATATTATGTGCATTGAAGTTTGGCAAGAAGAGGCGCAGCCAGCTGTTGGCTGTGTGTGATTTATGTCATGATGTCTATTTCTCTGGAGGAGTCAAATGTCCTTCCTGTCATAGAACCTTCATTGCTTGTAAGACCAAACCTGGTTATTCCAAACATATTGCTCACTCTGAAGGCAAGCCGAAGATTGGCACAGATTATTTTCATGTTTCATCTTACCTGCCTTTAAGGATGAGATTGCTGAAGGTTTTGTTATCAGTTGTTGAGGTTTCCCTTCCCCAAGAAGCTTTTCAACCGCTTTGGACAGACAGCTACAGGAAATCTTGGAGTACTAAGCTCGATGCTTCCTCATCAACTGAACACCTTCTTGAGATATTGACTGTATTGGAAGGTGCCATAAAGAGGGAGTATTTGGCTTCAAACTACGAAACTACCTCTGAGTTGTTGGGTTCCTTTAGTTCTTCTGGATGCCCTACTAATGATTCCTTAGATGTTGAAAGGATACCTGTACTTCCATGGGTGCCATGTACTACAGCTGCAGTGACTTTAAGGCTCATGGTACTCGATGCATGCATATTTTACACCTTACAGCAAAAGACGGAGTCTGAAAAGGATAGGAGAATTCGAATTGTTATGAAGCTTCCATTAAAATATGCTTCTGCTAAAACTTCTTACAATGCTGGTGCAATTGAAACTTCACATCAGGCTGAGCATACTGTACAAAACAGGGTTGCTCATGGTGCTGGCCTTGCAAGCTACAGCAGAGGACAAAGGTCCAGACAGGGCCGAAGCCATTCCCGTGGTGTGAGTGGAAGATCACAAGGAAGGGTTCTTAGTTTAAGAACCAATTGTATAAAGACAAGCACTACCTCTAGTTGCAGGAAAATGGGAAATTTACTTGGATGGAAAGGGAGACCATGTGGGCGTGGACATGTTCGTGGTAGCCGGAGCATTCGAAGTAGGCAAAAACCAGCAGTCAAGGTGGATGTGATCAGTGGTGTGAGGGATACTATGAAAGATATCGCAGAGGAAGCAGAGGAGGTTAATGGAGGTGAAATGGTCGCCACCACTAGAAATGCTAGCAGTTCTGAAAGATTAGGCTATGAAGATGATATTTATCAAGCAACAGGTGATGGGTATGATTATCTGGTGGATAATAATGATGGATATCACGGTGGATTTAGTGGAAAGTCTGAGAACTGCATAAAGGGAAGCGGCTATAATGTGGATTATGAGGAAAATGAGGATATTGATGATAATGGTAATGGTGGTGGTAATGATGTTGACGGTGACTACAGTGATGATGATGATGATGATGGGCAAGTAGATCTTGATGTTGAAGATTATATAATTGGGGATTCGGATACAGACACAAAAGAAAATGCAGAACAAAGCACGGATCTGGATGGAGCAGATTACGACAGTGATTAA 5076 0.4332 MEGGGSEEEKNKEKPLEVENNKTKRKMKTASQLEVLEKTYAVETYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRKAVPGGKKLRNDSPPLAPVGEGVEQMAVADVVHDHGFPSGLRPFGHLDSRRVVLPRPGMAFPRMGTGLSATESKSYYEAHQTIEELRAVAFVERQLQEPLREDGPILGMEFDSLPPGAFGAPIGAATMEQHRQSERPFEAKIYEQLDKGVSRTLHEYQFIPEQPTVRNETIGRVVPSRSYSSLNGISHSRTLLSSCQSFLDGKEYTSYGYGVKGQTPGLNLLSQQGRQNHLLPSASGEIDGVPLKNPFVDVTVDVHSGAHPIALIDSQLVPSDKRVIHEEELARFQRKRKSDEARMQRELEAQEKRIRKELEKQDILRRKREEQLKKEMERNDRERRKEEERLLRERQRQEERYQREQRRELERREKFLQKETIRAEKLRQKEELRREKEAARIKAANERAISRRMAKESMELIEDERLELMGLATLKKGLSSILALDSETMQNLESYGDGRTPFPPKSVQLKRPFSIQPWSDSEENVGNLLMVWRFLNTFADVFGIWPFTLDELIQAFHDYDPRLLGEIHIALLRSIMKDIEDVARRASTGLGANQNNVANSGGGHPQVVEGAYVWGFDIRNWQQHLNPLTWPEILRQFALSAGFGPKLKKQNIEPVHPCDNNEGNDGKDIISNLRSGAAVENAVVFMQEKGLSNPGRSRHCLTPGTVKFAAFHVLSVEGSNGLNILEVADKIQKSGLRDLRTSKTPEASIGAALSRETKLFERIAPSTYCVRPAYRKDPADAEAIFSAARDRIRVFKSGYVDAGEVDDGERAEDSESDETEDPEADDLGAETNTKTVGPISVECNANNVMRSTKDSDEVCQTLDGCHGNEKMNEDLASINSEGIHAQKGASASSEIAPCRNDFANPNLSSVDIDESIPAEPWVQGLTEGEYSDLSVEERLNALVALIGVAIEGNSIRVILEERLEAANALKKQMWAETQLDKRRIKEDHFVKMHSVSYFSNINEPTGAFPSVEDKLNPLLSVDDKNDKALLTPHVLHNQINELQENQSHLQCSFEVNQEIQDYSAVQYNYSFQQPGYAAEKSRSNMKSYIGHLAEQTYMCRSLPLGLDRRHNRYWQFITSASQNDPGCGRIFVELHDGCWRLIDSEVGFDALLASLDLGRNEADNNDAFMRYQDFEKWMQNECLNSSILCALKFGKKRRSQLLAVCDLCHDVYFSGGVKCPSCHRTFIACKTKPGYSKHIAHSEGKPKIGTDYFHVSSYLPLRMRLLKVLLSVVEVSLPQEAFQPLWTDSYRKSWSTKLDASSSTEHLLEILTVLEGAIKREYLASNYETTSELLGSFSSSGCPTNDSLDVERIPVLPWVPCTTAAVTLRLMVLDACIFYTLQQKTESEKDRRIRIVMKLPLKYASAKTSYNAGAIETSHQAEHTVQNRVAHGAGLASYSRGQRSRQGRSHSRGVSGRSQGRVLSLRTNCIKTSTTSSCRKMGNLLGWKGRPCGRGHVRGSRSIRSRQKPAVKVDVISGVRDTMKDIAEEAEEVNGGEMVATTRNASSSERLGYEDDIYQATGDGYDYLVDNNDGYHGGFSGKSENCIKGSGYNVDYEENEDIDDNGNGGGNDVDGDYSDDDDDDGQVDLDVEDYIIGDSDTDTKENAEQSTDLDGADYDSD* 1692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2069 1691 MobiDBLite consensus disorder prediction 1467 1490 - -
Dod03g2069 1691 Pfam HB1, ASXL, restriction endonuclease HTH domain 734 801 IPR007759 GO:0006355
Dod03g2069 1691 SUPERFAMILY Homeodomain-like 19 78 IPR009057 -
Dod03g2069 1691 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1185 1678 IPR044977 GO:0006357
Dod03g2069 1691 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 5 1187 IPR044977 GO:0006357
Dod03g2069 1691 MobiDBLite consensus disorder prediction 833 862 - -
Dod03g2069 1691 ProSiteProfiles 'Homeobox' domain profile. 19 79 IPR001356 GO:0003677
Dod03g2069 1691 Coils Coil 370 479 - -
Dod03g2069 1691 MobiDBLite consensus disorder prediction 404 434 - -
Dod03g2069 1691 MobiDBLite consensus disorder prediction 1 28 - -
Dod03g2069 1691 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1185 1678 - -
Dod03g2069 1691 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 5 1187 - -
Dod03g2069 1691 Gene3D - 17 81 - -
Dod03g2069 1691 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1130 1166 IPR028941 -
Dod03g2069 1691 CDD homeodomain 22 78 IPR001356 GO:0003677
Dod03g2069 1691 SMART HOX_1 21 83 IPR001356 GO:0003677
Dod03g2069 1691 ProSiteProfiles DDT domain profile. 552 611 IPR018501 -
Dod03g2069 1691 ProSiteProfiles HARE-type HTH domain profile. 734 803 IPR007759 GO:0006355
Dod03g2069 1691 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 949 990 IPR028942 -
Dod03g2069 1691 SMART testlast3 552 611 IPR018501 -
Dod03g2069 1691 MobiDBLite consensus disorder prediction 1667 1681 - -
Dod03g2069 1691 Pfam Homeodomain 22 78 IPR001356 GO:0003677
Dod03g2069 1691 MobiDBLite consensus disorder prediction 1626 1691 - -
Dod03g2069 1691 MobiDBLite consensus disorder prediction 1644 1666 - -
Dod03g2069 1691 MobiDBLite consensus disorder prediction 1469 1490 - -
Dod03g2069 1691 MobiDBLite consensus disorder prediction 836 856 - -
Dod03g2069 1691 Pfam DDT domain 553 608 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2069 Dod-Chr3 48569897 48584860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2069 21 1421 Homeobox Transcription Factor Family AT5G44180 49.495 0.0 1259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dod03g2069 HARE-HTH 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2069 - - gmx:100797480 1563.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2069 03 48569897 48584860 Dod03g2069 03 48569897 48584860 ECH