Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2062 ATGACTCAGTGTAGTGACCCTCAAAACAGCCATAATAACATCATAGTGGAGGGACGAAAAGACAGCTTAATTAGAACTTGCCCTACATGTGGTCATCATATCAAAGGCCAGGATCAGGCTGGTGGAATTCATGACTTACCTGGACTGCCTGCCGGAGTTAAGTTTGATCCTACAGATCAAGAGATTCTAGAACATTTAGAAGCGAAGGTGCGCTCTGATATTCATAAACTCCACCCGCTAATTGATGAGTTTATCCCAACTCTTGAAGGCGAAAATGGAATCTGCTATACTCATCCAGAGAAGTTGCCAGGAGTAAGCAAAGATGGCCTGATCCGCCATTTTTTTCACCGACCATCCAAAGCATACACAACAGGAACAAGGAAAAGGAGGAAGGTGCACTCTGATGAAGATGGTAGTGAGACCCGTTGGCACAAAACAGGAAAGACCAGGCCAGTCTATATCAGCGCCAAGTTGAAAGGGTACAAGAAAATTCTTGTTCTTTACACAAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTCATGCACCAGTACCACCTTGGCAGTGATGAAGAAGAGAAAGAAGGGGAGTTAGTGGTGTCCAAAGTCTTCTACCAAACACAACCTAGACAATGTGGTTCACTGATGAAAGACTCATCGGTTCCGGCAAAACTTATGAAGGGTCAAAGCATGCATGAGGTCATTAATAATAAAAGCAATAATAATGGCTTTGTTGAGTACTACCATTCAAATTTCATATCATTTGATCAAGGGAGCCATCATAGATCAACCAGTCCTCAGGCGGTTTCCCATTTTCCTGTCCATGATGGGGCTTCTTTCATTCCTTGA 855 0.4304 MTQCSDPQNSHNNIIVEGRKDSLIRTCPTCGHHIKGQDQAGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYISAKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCGSLMKDSSVPAKLMKGQSMHEVINNKSNNNGFVEYYHSNFISFDQGSHHRSTSPQAVSHFPVHDGASFIP* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2062 284 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Dod03g2062 284 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 283 - -
Dod03g2062 284 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Dod03g2062 284 MobiDBLite consensus disorder prediction 128 144 - -
Dod03g2062 284 MobiDBLite consensus disorder prediction 261 284 - -
Dod03g2062 284 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Dod03g2062 284 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 283 IPR044799 GO:0003700
Dod03g2062 284 MobiDBLite consensus disorder prediction 123 144 - -
Dod03g2062 284 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2062 Dod-Chr3 48376577 48379422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2062 1 284 NAC Transcription Factor Family AT4G28500 58.413 1.99e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod03g2062 NAM 3.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2062 - - gmx:100797459 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2062 03 48376577 48379422 Dod03g2062 03 48376577 48379422 ECH