Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2043 ATGGAATCAACTCAATCAAGTAACGGTGAAGAGCATGGTTCCAAGCTGCTTGGAGCTCAAACCCACCTATGGAATCACATTTTGAGCTTCATAAATTCCATGTCCCTTAAATGTGCAATTGACTTAGGCATACCAGATGCCATACACAACTATGGCCAACCCATGCCACTCTCAAAACTCATTGCTTCTCTACAAATCCACCCAAACAAAACACACTGCATCCACCGCTTGATGCGTATTATGACTCATTCTGGCTTCTTCTCTCAACAAAATAATGTAATTGAGGATGAGCTAGAAGTGAGTTATGCGCTAACTGACGCATCAATGCTGTTGCTTAAGGACAACCCCATGACTCTAACCCCTTGCTTGTCTGCCATGATTGATCCAATTTTGACAAAGCCATGGTATCAATTGCCAACATGGTTCAAAACTGATGATGTTACACCGTTTGAAATGACACACGGGATGCCAATCTGGCATTATGCTGGCTCCGAGCCAAGGTTTAATCACTTTTTAAATGATGCCATGGCAAGTGATACCGCATTTATTTCAAGCATTGTGTTTGGGAAGTGCAAGGGGGTGTTTGAGGGGTTAGAGTCTTTGGTTGATGTTGGGGGAGGCACAGGGACTATGGCTAAGGTTATTGCCAATTCATTCCCACAAACGGAGTGCGTTGTGTTTGATCTTCCACATGTTGTCGATGGCTTGCAAGGAAGTAAGAACCTGAAGTATGTTGGAGGGGACATGTTTGAGTCAATTCCTCCTGCAGATGCCATTTTATTGAAGTGGATATTGCACGATTGGAGCGATGAGGAATGTGTGAAAATACTGAAGAAATGCAAGGAGGCAACCACGAGCAACAAAGAAAAGAAAGGAAAAGTTATTATCATGGACATGATAGTCGGGAATGAAAAGGATGATGATAAATCAGTTGAAACAAAACTCTTCTTTGATATGATGATGATGGCAATTTTCAGTGCAAAAGAGAGAGATGAGGAAGAATGGGCCGAGTTGATTTTCTCTGCCGGTTTTAGTGACTACAAGATAACTTCAGCTTTGGGATTAAGGTCGCTCATTGAGATCTATCCATAG 1092 0.4231 MESTQSSNGEEHGSKLLGAQTHLWNHILSFINSMSLKCAIDLGIPDAIHNYGQPMPLSKLIASLQIHPNKTHCIHRLMRIMTHSGFFSQQNNVIEDELEVSYALTDASMLLLKDNPMTLTPCLSAMIDPILTKPWYQLPTWFKTDDVTPFEMTHGMPIWHYAGSEPRFNHFLNDAMASDTAFISSIVFGKCKGVFEGLESLVDVGGGTGTMAKVIANSFPQTECVVFDLPHVVDGLQGSKNLKYVGGDMFESIPPADAILLKWILHDWSDEECVKILKKCKEATTSNKEKKGKVIIMDMIVGNEKDDDKSVETKLFFDMMMMAIFSAKERDEEEWAELIFSAGFSDYKITSALGLRSLIEIYP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2043 363 Pfam O-methyltransferase domain 135 345 IPR001077 GO:0008171
Dod03g2043 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 361 IPR029063 -
Dod03g2043 363 PANTHER ORCINOL O-METHYLTRANSFERASE 9 363 - -
Dod03g2043 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Dod03g2043 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Dod03g2043 363 CDD AdoMet_MTases 201 297 - -
Dod03g2043 363 Gene3D Vaccinia Virus protein VP39 112 363 IPR029063 -
Dod03g2043 363 PANTHER O-METHYLTRANSFERASE 9 363 IPR016461 GO:0008168
Dod03g2043 363 Gene3D - 4 111 IPR036388 -
Dod03g2043 363 SUPERFAMILY "Winged helix" DNA-binding domain 12 116 IPR036390 -
Dod03g2043 363 Pfam Dimerisation domain 34 81 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2043 Dod-Chr3 47343674 47351751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2043 34 361 Monolignol Biosynthesis Gene Families AT5G54160 34.535 2.30e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2043 - K16040 gmx:100807238 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2043 03 47343674 47351751 Dod03g2043 03 47343674 47351751 ECH