Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2042 ATGTTTGAGGCAATTCCTCCTGTAGATGCTGTTTTGTTGAAGTTTATATTGCATAACTGGAATGATGAGCAATGTGTGAAAATATTGAAGAAATGCAAGGAGGCAATCGCCAACAAAGGCAAGGAGGGAAAGGTGATAATCATAGACATGGTCATAGGCAATGAGAAAGGAGACAGTGAATCAATGGAAACACAACTCTTCTATGATATGGAGATGATGGTGTTGGTCACCGGAAAGGAGAGAAATGAGAAAGAATGGGCCAAGCTGATTTTATCTGCCGGTTTTAGTACCTACAAGATAACCCCAGTTCTGAGTTTAAGGTCGCTCATTCAGGTTTATCCGTAG 345 0.4087 MFEAIPPVDAVLLKFILHNWNDEQCVKILKKCKEAIANKGKEGKVIIIDMVIGNEKGDSESMETQLFYDMEMMVLVTGKERNEKEWAKLILSAGFSTYKITPVLSLRSLIQVYP* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2042 114 PANTHER O-METHYLTRANSFERASE 1 114 IPR016461 GO:0008168
Dod03g2042 114 Gene3D Vaccinia Virus protein VP39 1 114 IPR029063 -
Dod03g2042 114 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 111 IPR029063 -
Dod03g2042 114 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 114 IPR016461 GO:0008168
Dod03g2042 114 PANTHER ORCINOL O-METHYLTRANSFERASE 1 114 - -
Dod03g2042 114 Pfam O-methyltransferase domain 1 96 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2042 Dod-Chr3 47299807 47301003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2042 1 114 Monolignol Biosynthesis Gene Families AT1G51990 39.655 4.43e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2042 - K16040 gmx:100807238 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2042 03 47299807 47301003 Dod03g2042 03 47299807 47301003 ECH