Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2035 ATGGCAGGTCCCATCGTTCTTCGTTCCCTCTGGTCTTCCACCAGAAAATCCGTTACCTCGTCCCCTTCCCTTCTCTCTTCTTCTCGATCCTTCTTCCCCCGACTCAACCACCTCTCACGAGCCTTCTCCGCCGCCGCTCCCGCCACCGCCGCCGCCGGTGGAGATCCTGGCGGCGCCCTTGACCCCGGCCGCCTCCGCAACGTGGCGGTGATCGCCCACGTCGACCACGGAAAGACCACGCTCATGGATCGCCTGCTCCGCCAGTGCGGAGCCGACATCCCCCACGAGCGCGCCATGGACTCCATCTCGCTCGAGCGCGAGCGAGGCATCACCATCGCCTCCAAGGTTACGTCCATTTCGTGGAAAGAGAATGAGCTGAACATGGTTGATACTCCTGGACACGCAGATTTTGGTGGTGAAGTTGAACGTGTTGTTGGTATGGTTGAGGGAGCCATTTTAGTTGTTGATGCTGGTGAAGGTCCACTTGCACAAACAAAATTTGTTCTTGCGAAAGCCTTAAAGTATGGGCTGCGGCCTATTCTTCTTTTAAATAAAGTAGACCGACCTTCAGTTACTGAGGAGACGTGTGATGAAGTAGAGAGTCTGGTGTTTGATCTGTTTGCCAACCTGGGTGCTACAGAGGAGCAACTAGACTTTCCAGTTCTTTATGCTTCTGCTAAAGAAGGATGGGCCTCTACCACGTTTACCAAGGATCCTTCTGCTGAGGCCAAGAATATGTCACAATTGCTTGATGCTATTGTTTCACATGTCCCACCACCAAATGCAAGCATTGATGCACCTTTCCAAATGCTGGTTTCAATGATGGAACGGGACTTCTATCTGGGTCGAATTTTGACTGGACGCATATATTCTGGGGTTGTTCGTGTTGGTGATAGGGTTCATGGACTGCGTAATAAGGATTCTGTTGCTGAAAAGATTGAAGATGGAAAGGTGGTAAAACTGATGAAAAAGAAGGGTACAAACATAGTTCTAACAGAATGTGCTGGAGCTGGTGATATAATTTCTGTAGCTGGCTTGGCAAGTCCATCAATAGGGCACACAGTGGCAACTGTGGAGATTTTGTCTGCATTGCCCACAATTGAATTGGATCCTCCAACAATTTCCATGACCTTTGGTGTAAATGACTCCCCATTGGCTGGTCGTGATGGTACTCATTTGACTGGAGGAAGGATTGGTGACCGACTGATGGCTGAAGCTGAAACAAACCTTGCCATAAATGTGCTTCCAGGCTTATCAGAATCGTATGAAGTTCAGGGAAGAGGAGAGCTACAGCTGGGTATCCTAATTGAAAACATGAGACGCGAGGGATTTGAGTTATCTGTCTCCCCGCCTAAAGTCATGTATAAAACTGAAAATGGTCAGAAACTTGAACCAATAGAAGAAGTTACAATTGAGGTAAATGATGAGCAGGTTGGGTTGGTGATGGAGGCCTTGTCTCATAGGCGAGCTGAGGTCACTGACATGGGTCCTGTCTCAGGAGCTGTTGGTCGGACTAGATTGTCTTTGTCTTGTCCATCAAGGGGTCTGGTTGGTTACAGGAGTGTGTTCAGTAGTGACACGCGTGGAACTGGGTTCATGCATCGTGCTTTCCTTGCATATGAAAAGTTTCGAGGCCCTCTTGGCAATGTTAGAAAAGGAGTACTGGTGTCAATGGGCTTTGGTACAATCACAGCTCATGCATTGATGAGTTTAGAAGCACGTGGGACTCTTTTTGTAACTCCTGGAATGGAGACATATGATGGAATGATTGTTGGAGAACATTCACGGGATACCGATCTTGATATCAATCCAGTGAGAGCTAAAGAACTTACAAATGTGCGTGCTGCTGCCAAGGATGAGAATGTGAAGCTGTCTCCCCCTCGTCTTATGACGCTTGAAGAAGCTATAGGGTATGTGGTATCAGATGAGCTTATTGAGGTTACACCAAAGGCCATCCGGTTACGGAAGAAATATCTTGATGTTAACAAGCGTAAAGCCATGAGTAAAAAGCCAAAGGAATGA 2022 0.4812 MAGPIVLRSLWSSTRKSVTSSPSLLSSSRSFFPRLNHLSRAFSAAAPATAAAGGDPGGALDPGRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSISWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPSVTEETCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPSAEAKNMSQLLDAIVSHVPPPNASIDAPFQMLVSMMERDFYLGRILTGRIYSGVVRVGDRVHGLRNKDSVAEKIEDGKVVKLMKKKGTNIVLTECAGAGDIISVAGLASPSIGHTVATVEILSALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNLAINVLPGLSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGQKLEPIEEVTIEVNDEQVGLVMEALSHRRAEVTDMGPVSGAVGRTRLSLSCPSRGLVGYRSVFSSDTRGTGFMHRAFLAYEKFRGPLGNVRKGVLVSMGFGTITAHALMSLEARGTLFVTPGMETYDGMIVGEHSRDTDLDINPVRAKELTNVRAAAKDENVKLSPPRLMTLEEAIGYVVSDELIEVTPKAIRLRKKYLDVNKRKAMSKKPKE* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2035 673 Gene3D Elongation Factor G (Translational Gtpase), domain 3 373 657 - -
Dod03g2035 673 PRINTS GTP-binding elongation factor signature 179 188 IPR000795 GO:0003924|GO:0005525
Dod03g2035 673 PRINTS GTP-binding elongation factor signature 143 154 IPR000795 GO:0003924|GO:0005525
Dod03g2035 673 PRINTS GTP-binding elongation factor signature 107 115 IPR000795 GO:0003924|GO:0005525
Dod03g2035 673 PRINTS GTP-binding elongation factor signature 67 80 IPR000795 GO:0003924|GO:0005525
Dod03g2035 673 PRINTS GTP-binding elongation factor signature 127 137 IPR000795 GO:0003924|GO:0005525
Dod03g2035 673 CDD TypA_BipA 65 260 - -
Dod03g2035 673 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 6 672 - -
Dod03g2035 673 PANTHER ELONGATION FACTOR FAMILY PROTEIN 6 672 - -
Dod03g2035 673 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 63 261 IPR000795 GO:0003924|GO:0005525
Dod03g2035 673 Pfam Elongation factor G C-terminus 462 545 IPR000640 -
Dod03g2035 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 270 IPR027417 -
Dod03g2035 673 SUPERFAMILY EF-G C-terminal domain-like 464 580 IPR035647 -
Dod03g2035 673 Gene3D bipa protein 550 665 IPR042116 -
Dod03g2035 673 Pfam Elongation factor Tu domain 2 282 355 IPR004161 GO:0005525
Dod03g2035 673 CDD BipA_TypA_C 464 544 IPR035651 -
Dod03g2035 673 Pfam Elongation factor Tu GTP binding domain 64 258 IPR000795 GO:0003924|GO:0005525
Dod03g2035 673 Gene3D Translation factors 263 366 - -
Dod03g2035 673 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 100 115 IPR031157 -
Dod03g2035 673 Gene3D - 63 261 IPR027417 -
Dod03g2035 673 CDD BipA_III 372 449 - -
Dod03g2035 673 SUPERFAMILY EF-G C-terminal domain-like 370 453 IPR035647 -
Dod03g2035 673 SUPERFAMILY Translation proteins 210 366 IPR009000 -
Dod03g2035 673 Gene3D - 455 549 - -
Dod03g2035 673 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 65 665 IPR006298 GO:0005525
Dod03g2035 673 CDD BipA_TypA_II 268 365 - -
Dod03g2035 673 TIGRFAM small_GTP: small GTP-binding protein domain 66 205 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2035 Dod-Chr3 47146051 47171127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2035 64 188 Eukaryotic Initiation Factors Gene Family AT3G22980 42.748 1.26e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2035 K06207 - gmx:100782425 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2035 03 47146051 47171127 Dod03g2035 03 47146051 47171127 ECH