Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2033 ATGCACTCAGCATGCGCGGCATGCAAGCATCAAAGGAAGAAGTGCAGTGAAAATTGTATATTGGCACCTTATTTTCCAGCAAACAGAAGCCGTGAGTTCAATGCTGTGCACAAGGTTTTTGGTGTGAGCAACATAACCAAGTTGGTGAAGAATGCTAAGGAGGAAGATCGAAGAAGAGTTGTGGATTCATTGATATGGGAAGCATCTTGCAGGCAAAGGGATCCTATACATGGCCCTTATGGAGAGTACGCAAAAGTTTACAATGAGTATAAAAAAGTGTTCAACGAACTTGAGATAGTTAGATCAACCCAAAACCAACCAGTGCAAATGCCATCTCAGGGATTCAAGTCCGTACAAGATTTTATTGCTAGTAGTGGGACTAAAGGGAAACACAAAGCAGAAGCAATTGATGATGCATTGGATTATCTTCAGGAGAATAAGAATGGCATTATTGATTCCAACATTTATAATAGCTATTGTTCAAATTATTTACAAGATTTGGATAGTTTGAGGCAGGAAGTTGTCATCCCATTCCAGCACTCTCAGCCATACTATATTACAGGTAATCAATTCAATCAATGA 582 0.3935 MHSACAACKHQRKKCSENCILAPYFPANRSREFNAVHKVFGVSNITKLVKNAKEEDRRRVVDSLIWEASCRQRDPIHGPYGEYAKVYNEYKKVFNELEIVRSTQNQPVQMPSQGFKSVQDFIASSGTKGKHKAEAIDDALDYLQENKNGIIDSNIYNSYCSNYLQDLDSLRQEVVIPFQHSQPYYITGNQFNQ* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2033 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 163 - -
Dod03g2033 193 ProSiteProfiles LOB domain profile. 3 104 IPR004883 -
Dod03g2033 193 Pfam Lateral organ boundaries (LOB) domain 4 100 IPR004883 -
Dod03g2033 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 2 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2033 Dod-Chr3 47106261 47108483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2033 2 193 AS2 family AT1G06280 39.899 1.62e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod03g2033 LOB 1.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2033 - - gmx:100809173 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2033 03 47106261 47108483 Dod03g2033 03 47106261 47108483 ECH