Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod03g2033 | ATGCACTCAGCATGCGCGGCATGCAAGCATCAAAGGAAGAAGTGCAGTGAAAATTGTATATTGGCACCTTATTTTCCAGCAAACAGAAGCCGTGAGTTCAATGCTGTGCACAAGGTTTTTGGTGTGAGCAACATAACCAAGTTGGTGAAGAATGCTAAGGAGGAAGATCGAAGAAGAGTTGTGGATTCATTGATATGGGAAGCATCTTGCAGGCAAAGGGATCCTATACATGGCCCTTATGGAGAGTACGCAAAAGTTTACAATGAGTATAAAAAAGTGTTCAACGAACTTGAGATAGTTAGATCAACCCAAAACCAACCAGTGCAAATGCCATCTCAGGGATTCAAGTCCGTACAAGATTTTATTGCTAGTAGTGGGACTAAAGGGAAACACAAAGCAGAAGCAATTGATGATGCATTGGATTATCTTCAGGAGAATAAGAATGGCATTATTGATTCCAACATTTATAATAGCTATTGTTCAAATTATTTACAAGATTTGGATAGTTTGAGGCAGGAAGTTGTCATCCCATTCCAGCACTCTCAGCCATACTATATTACAGGTAATCAATTCAATCAATGA | 582 | 0.3935 | MHSACAACKHQRKKCSENCILAPYFPANRSREFNAVHKVFGVSNITKLVKNAKEEDRRRVVDSLIWEASCRQRDPIHGPYGEYAKVYNEYKKVFNELEIVRSTQNQPVQMPSQGFKSVQDFIASSGTKGKHKAEAIDDALDYLQENKNGIIDSNIYNSYCSNYLQDLDSLRQEVVIPFQHSQPYYITGNQFNQ* | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod03g2033 | 193 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 2 | 163 | - | - | |
Dod03g2033 | 193 | ProSiteProfiles | LOB domain profile. | 3 | 104 | IPR004883 | - | |
Dod03g2033 | 193 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 100 | IPR004883 | - | |
Dod03g2033 | 193 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 2 | 2 | 163 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod03g2033 | Dod-Chr3 | 47106261 | 47108483 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod03g2033 | 2 | 193 | AS2 family | AT1G06280 | 39.899 | 1.62e-39 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Dod03g2033 | LOB | 1.4e-34 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod03g2033 | - | - | gmx:100809173 | 298.13 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod03g2033 | 03 | 47106261 | 47108483 | Dod03g2033 | 03 | 47106261 | 47108483 | ECH |