Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2025 ATGGGAATGAGGAGCAACACTGGAGGAGAGATTGTTCAGGTGGAAGGAGGACACATTGTTAGGTCCATAGGTAGAAAAGATCGGCACAGCAAGGTGTACACTGCGAAAGGCCCTCGCGATCGCAGGGTTAGGCTCTCAGCACACACGGCCATTGAGTTCTATGATGTTCAAGACCGCCTTGGATATGACAGGCCCAGCAAGGCCGTGGACTGGCTCATCAAGAAAGCGAAGCCTTCCATCGACAAGCTTGCTGAGCTTCCTCCATGGCATCCAGCAGCAGGTGATGAAAGTACTGCACAAGAAGCACAAGAGGAAGAAGAACATAATAATAATAATGATGCAGCAGGGTCAAGTGACATGGCCAACAACAACATTGGTCAACAATTTGAGTCTAATAATGGCTACGGTTTCCAATTCCAAAGGCAATTAGGTGAGAACCACCAAGATAACCATCATTCCACCTTCATTCCAACACAACCGCAACACATTGACACTGACCCCATAGCTTTCTTCCCTACAACCTCGGCAACTTCCTCCATCAATTTCCAGAACTACCCTCCTGATATAATCTCAAGAACCGACAACCCCACAGAAGATCTTGGCCTCTCCCTTCACTCATTCCAACCAGGCGCAAATCAAGCACCTTCTTCTAATGAACAGCAAAGTACCCTTTTTGGTGGCTCCACTAACGTAGGGGGGTTTGAGAGCCATTACCAAAAGATTGTGGCTTGGAACACTGAGGCATCCATGGACATGAACAGGGTGGGGTTCATGGTGAACTCGCAGCCATTTCTAGGCCAAGGTGCTGCAGCATATTCTCATCAAAATGGGACCCTTCAGTCCTCATCAAGCTTTTCACCATCACTGCGCTCTTGGAGTGACATTCCAATGAACTCAAACTCCTCAGAACATCACAGGTCACAACAACAAGAACAACAACCAATTCACCAAGCTTCAATCTTTGGCAGCAGGTTTCTTTCTGATGGGTTAGCAGGGTTCTGCATTCCAGCAAGAATTCAAGGTGAGGAAGAGAACCGTGGAGCTGCTTCTAACAGTCCATCTTCTGCTTCTCCCAATTAA 1080 0.4759 MGMRSNTGGEIVQVEGGHIVRSIGRKDRHSKVYTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPSIDKLAELPPWHPAAGDESTAQEAQEEEEHNNNNDAAGSSDMANNNIGQQFESNNGYGFQFQRQLGENHQDNHHSTFIPTQPQHIDTDPIAFFPTTSATSSINFQNYPPDIISRTDNPTEDLGLSLHSFQPGANQAPSSNEQQSTLFGGSTNVGGFESHYQKIVAWNTEASMDMNRVGFMVNSQPFLGQGAAAYSHQNGTLQSSSSFSPSLRSWSDIPMNSNSSEHHRSQQQEQQPIHQASIFGSRFLSDGLAGFCIPARIQGEEENRGAASNSPSSASPN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2025 359 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 357 IPR005333 GO:0003700
Dod03g2025 359 MobiDBLite consensus disorder prediction 113 132 - -
Dod03g2025 359 MobiDBLite consensus disorder prediction 148 170 - -
Dod03g2025 359 ProSiteProfiles TCP domain profile. 25 83 IPR017887 -
Dod03g2025 359 PANTHER TRANSCRIPTION FACTOR TCP4 2 357 - -
Dod03g2025 359 MobiDBLite consensus disorder prediction 277 314 - -
Dod03g2025 359 Pfam TCP family transcription factor 25 132 IPR017887 -
Dod03g2025 359 MobiDBLite consensus disorder prediction 83 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2025 Dod-Chr3 46838910 46839989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2025 9 357 TCP Transcription Factor Family AT3G15030 44.221 2.74e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod03g2025 TCP 4.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2025 - - gmx:100796390 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2025 03 46838910 46839989 Dod03g1854 03 35960752 35964540 ECH
Dod03g2025 03 46838910 46839989 Dod03g2025 03 46838910 46839989 ECH