Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2013 ATGAGTGTGATTGATGAACATCTTATATCTTCAGCTGCTGCTGGTGGATCAACTACGTTTTATCAAAAGATGTCCTGTAATCTTGCAAAGCAGGCTTCTGATGAAGCTATTTCTGAGCTTGGCACCTTGGGCGAGGAGTCATTCAAAGATGGTACCTTGATCATGCAGCTTCACATGGACAGCCTTACCATGTGGATTTCTGACATCCCAGAAGATGGAGTGTTTAATGCACTTTCTGTTACCATTATCCAGCTTGATATTTCAAGCATGTTGGGTTGCCTCTGGTGGAGAATTCGGTGGCTGGTTTCGATACTTTGGTATTTCCTTTTGGACAGATACTCAATGAGCAAATCTGTCTATGAGAAAGCTGCTGCAACCGCAGGAATCAATAATTTGAAGACTGGAAACTTGATCTCTTTGTCAGAACAAGAGCTTGTTGATTCTGATACAAATTGTGCGGACCAAGGCTGTGAGGGAGGTCTAATGGATGATGCATTCAAATTCATCATTAAAAATGGAGGACTGACCACTGAAGTGAAATACCCCTATCAAAGTGTTGATGGAACACGCAATACAAAAGCAGCAGGCAACCATGCTACTACCATTACTGGGTATGAGGATGTCCCTGCCAACAGTGAGAAGGAACTGCAACAAACAGAGGCTAACCAACCAGTTTCTGTAGCTATTGATGCTAGTGGCAATGACTTCCAATTTTACAGAAGTGTGTCTTCACTGGTAGTTATGGCACCGAGTTGGATCATGGTGTCACTGCTGTAG 777 0.4311 MSVIDEHLISSAAAGGSTTFYQKMSCNLAKQASDEAISELGTLGEESFKDGTLIMQLHMDSLTMWISDIPEDGVFNALSVTIIQLDISSMLGCLWWRIRWLVSILWYFLLDRYSMSKSVYEKAAATAGINNLKTGNLISLSEQELVDSDTNCADQGCEGGLMDDAFKFIIKNGGLTTEVKYPYQSVDGTRNTKAAGNHATTITGYEDVPANSEKELQQTEANQPVSVAIDASGNDFQFYRSVSSLVVMAPSWIMVSLL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2013 258 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Dod03g2013 258 PRINTS 14-3-3 protein zeta signature 12 38 IPR000308 -
Dod03g2013 258 Pfam Papain family cysteine protease 124 241 IPR000668 GO:0006508|GO:0008234
Dod03g2013 258 Gene3D Cysteine proteinases 119 248 - -
Dod03g2013 258 Gene3D - 24 75 IPR036815 -
Dod03g2013 258 PANTHER SENESCENCE-SPECIFIC CYSTEINE PROTEASE SAG39-LIKE 123 241 - -
Dod03g2013 258 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 123 241 - -
Dod03g2013 258 SMART pept_c1 109 257 IPR000668 GO:0006508|GO:0008234
Dod03g2013 258 SUPERFAMILY Cysteine proteinases 124 241 IPR038765 -
Dod03g2013 258 SUPERFAMILY 14-3-3 protein 23 74 IPR036815 -
Dod03g2013 258 CDD Peptidase_C1A 123 241 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2013 Dod-Chr3 46456080 46461260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2013 7 73 14-3-3 family AT1G26480 54.795 1.90e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2013 - K16292 gmx:102666929 172.555