Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2010 ATGCGTCCACCAATGAAAAAGGTCAATTTCCGTAGAGGGGATAAGGTGGAGGTGCGTGGTAAAGAAGAAGGGTTTTTTGGTTCTTACTACGAGGCAACCATTGTCTCATATGTTGACAATGGCCGCTATATGGTGCGTTATAAGAATCTTGTTGATGATAGCGAGTCCAAGCCTCTCATTGAGACTGTAAACCTTAGGGAGCTTCGTCCTTCCCCGCCTCTAGTTCGCAGTAGAAAGTTTTCACAACACCAAAAGGTTGATGCTTTTCATAATGATGGTTGGTGGATTGGAGATATCACTGGGAAAACGGGTTCTCAATACTCTGTGTATTTTGCTACATCTAATGATGAGTTTGTATACCCTTCAGTCCTTGATCAGGGCTCACCAAGATTGGATTCGTGGTGA 405 0.437 MRPPMKKVNFRRGDKVEVRGKEEGFFGSYYEATIVSYVDNGRYMVRYKNLVDDSESKPLIETVNLRELRPSPPLVRSRKFSQHQKVDAFHNDGWWIGDITGKTGSQYSVYFATSNDEFVYPSVLDQGSPRLDSW* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2010 134 Gene3D - 4 71 - -
Dod03g2010 134 SMART agenet_At_2 8 76 IPR014002 -
Dod03g2010 134 SMART agenet_At_2 78 133 IPR014002 -
Dod03g2010 134 CDD TUDOR 13 70 IPR002999 -
Dod03g2010 134 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 122 - -
Dod03g2010 134 Pfam Agenet domain 13 73 IPR008395 -
Dod03g2010 134 PANTHER - 8 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2010 Dod-Chr3 46411790 46412194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2010 19 118 PHD Transcription Factor Family AT5G58610 31.148 4.39e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2010 - - adu:107478045 156.762