Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2007 ATGCGACCACCACTGAAGAGGATCGACTTCCGTGAAGGCGACAAGGTGGAAGTTATCAGCAGGGAAGAAGGCTTCCTTGGCTCATACTACGAGGCCACCGTCCTCTCCCACCTCGACAGCGGCCACTTCGTCGTCCGCTACAAGACCCTCCTCCAAGACGACGACGTTTCCAAGCCCCTCATCGAGACCCTCTACCCAAGGGACCTTCGCCCTTCCCCTCCCAAAATCCACGCCCGCGACTTCTCCCTCTACCAGATGGTCGACGCCTTCGACAACGACGGCTGGTGGGTCGGTCAGGTCACTGGAACATTGGGCCCCACTCGCTACCACGTCTACTTCCACACCACCAACGAGGAGATTGCTTATCCTTCTTCCAAGCTCAGGGTCCACCATGAGTGGGTCAATGGGGTGTGGGTTTTGTCGCAGCGACCCCTCTGTAACTGA 444 0.5833 MRPPLKRIDFREGDKVEVISREEGFLGSYYEATVLSHLDSGHFVVRYKTLLQDDDVSKPLIETLYPRDLRPSPPKIHARDFSLYQMVDAFDNDGWWVGQVTGTLGPTRYHVYFHTTNEEIAYPSSKLRVHHEWVNGVWVLSQRPLCN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2007 147 Gene3D - 2 82 - -
Dod03g2007 147 SMART agenet_At_2 79 135 IPR014002 -
Dod03g2007 147 SMART agenet_At_2 8 77 IPR014002 -
Dod03g2007 147 Pfam Agenet domain 13 74 IPR008395 -
Dod03g2007 147 PANTHER - 8 142 - -
Dod03g2007 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2007 Dod-Chr3 46328892 46330201 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2007 20 133 PHD Transcription Factor Family AT5G58610 31.111 9.90e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2007 - - adu:107478045 244.202