Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2002 ATGGACTCCGTCGACGGAGCTCCGTCGCCCTCCACCCCAGCGCCGCCGCGCCTCCCACCGACGTCAGCGTCGCCGTTCCCGGGCCGCGAAGACTGCTGGAGTGAGGACGCAACGTTCACCCTCATCGACGCCTGGGGCGAGCGCTACCTTGAGCTCAACCGCGGCAACCTCCGCCAGAAGCACTGGCAGGAGGTCGCCGACGCCGTCAACCACCTCCACGCCGACGTCGGCACCGCCTCCGCTGTCGCAGCCGGAACCCCCAAGCGCCCCTGGCGGACCGACGTTCAGTGCAAGAACCGAATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGAACCCGGTGGCGGTTACCAGAGCCCCTGGCCCTTCTTCTCCAGCCTCGACGCCCTCATAGGCGACACTTTTCCGGCCAAAAAGCCCTCGCCGCCGGCAACCGGCCGGGGAACCCCTCTCTCCTCCGCCAAGCCGCCGGCGCCGCCGGCATGGATAACCTCCCACCCCGTCGGTCCCAGATCCGGCACTCAGAAAAGGCCGGCGCCGGCGCCGGCGCCGGCGAACCGCGAAGACTCGCACTTCCGGCGGAATTTCTCGGCCTTTGCCGCAGCGGCGGCGGCAGCTGCTGCGGAGGCCGAGAGCGGGGATTCGGAGGGGTCGGAGTCTCGGTCGAGCAGCGGCGGCGGGGGGCGGCGGAGGAGGAAGGAGAGGGAGGATGGGAGGACTTATTGTTGGGAGGTTGGGTACAGGGAGCTGGCTCAGGCAATTGAGAGGTTTGGGGAGATATATGAGAGGGTTGAGGCTGCAAAGCAGAGGCAGATGGTGGAGTTGGAGAAGCAGAGGATGCAGTTTGCTAAGGATTTGGAGTACCAGAGGATGCAGCTCTTCATGGAGACGCAGGTCCAGCTGCAGAAAATCAAACGCACCAAGCGCAGTTCTGGAGCTGCCTGCGGTGTAGACAGGATCCCATTACAAGTGTTATGTTGTCAGTGGTGTATTGTTGTGCCTGGCTGCTAA 1026 0.6423 MDSVDGAPSPSTPAPPRLPPTSASPFPGREDCWSEDATFTLIDAWGERYLELNRGNLRQKHWQEVADAVNHLHADVGTASAVAAGTPKRPWRTDVQCKNRIDTLKKKYKIEKARVSEPGGGYQSPWPFFSSLDALIGDTFPAKKPSPPATGRGTPLSSAKPPAPPAWITSHPVGPRSGTQKRPAPAPAPANREDSHFRRNFSAFAAAAAAAAAEAESGDSEGSESRSSSGGGGRRRRKEREDGRTYCWEVGYRELAQAIERFGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMQLFMETQVQLQKIKRTKRSSGAACGVDRIPLQVLCCQWCIVVPGC* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2002 341 Coils Coil 266 286 - -
Dod03g2002 341 MobiDBLite consensus disorder prediction 1 31 - -
Dod03g2002 341 MobiDBLite consensus disorder prediction 9 23 - -
Dod03g2002 341 Gene3D - 33 110 - -
Dod03g2002 341 MobiDBLite consensus disorder prediction 214 240 - -
Dod03g2002 341 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 7 318 - -
Dod03g2002 341 MobiDBLite consensus disorder prediction 139 193 - -
Dod03g2002 341 Pfam Myb/SANT-like DNA-binding domain 30 135 IPR044822 -
Dod03g2002 341 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 7 318 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2002 Dod-Chr3 45894440 45898384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2002 28 311 Trihelix Transcription Factor Family AT3G14180 35.632 1.73e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod03g2002 Myb_DNA-bind_4 9.5e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2002 - - lang:109355153 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2002 03 45894440 45898384 Dod03g2002 03 45894440 45898384 ECH