Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1996 ATGGCTGAGAGAATTTACATATATGAAGAAAACAAGAGCAAAGATAGTAGTGAGATTAGAGCCATAGCCTCTTCTCCAAGATCCAAAAAGCGTTCATTCTTGGACCTGAATGAAGAAGCAAAAGACGATGGCTTCAGTGATGCCGCAAGGGGTGAGATTAGTAGTAACAACAGATCATCCCCAGAAGGTAATTTGAGTAGCAACAACACAAGTGGAGAAGGTAAAGAGCGAGGAACTACAGCTAGGCAATATGTGCGGTCCAAAATGCCAAGGCTCCGTTGGACTCAAGATCTCCATCTAACTTTTGTGCATGCTATTGAGAGGCTTGGTGGAATGGAAAAAGCAACACCCAAGTTGGTTCTCCAATTGATGGATGTGAGAGGACTTAGCATTGCACATGTAAAGAGTCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAATCTGGCCAAGTTTTATCCCAACATAGAGCGATGCAAGAAAGGCATCAAATTTATGACATGCACGAAAGACTTGATGCCCAAAGGCACAATGGGGTTGGTCATAAGAGCTATGTACCATCATCTGTGGCGATGAAACAACCTTATGACTTCAAAGCTCATGAATCTTCAAGATTTCAGCAGGTTGGGTATTTGAATAATCACATGACAAGACCAAGTTCAATGTGGGGGCAAGATTCATGGTTATTTGAGGCTCCAAACTACAGAATTTTCCCTCAAAGGAACGAAAAGAAGACAAGCTCGCACCTTCATGTAATGGACGCAAATTCAAGAAATGGGCCTATTCTTGGCAAGAACTGGCCTCCTAAGGGAACGGCAGGATCACAGGGATACGACAAACAGGAATTTATAGGCAGCTCGTGGGATGACAAGTATTCTGAACTACCTTCTTCTTGGAGCATCAGAGCTAGCTCGGTCAACAATCAACATCAACGCAGTTCTTGCGCAACAATCTTCTCTAGCCACGTGAGGCTTGGTGCCGAGGTTCGAGAAATAAAAGAGGGAATGCTACAATTCACAAATGAGGTTCAGTTGTCTCCACAATGGCAGGTCAAAGCACAATTAGAAAGGTTGAAGGAGAACAAAGGATCAGCAGGTATGCTAGCGCTAAAGCTAAGCCAGCATATTGGAAATGTTAGAGAAACGAACGGAGGTACTACAGAAAGTGAACAAGGAATCAATACCATGCTTTCTCTTTCATTATTCCCTTCCTCACCATCGATGGATCAAGCTCTATGTTATTATAATAACTAG 1254 0.4274 MAERIYIYEENKSKDSSEIRAIASSPRSKKRSFLDLNEEAKDDGFSDAARGEISSNNRSSPEGNLSSNNTSGEGKERGTTARQYVRSKMPRLRWTQDLHLTFVHAIERLGGMEKATPKLVLQLMDVRGLSIAHVKSHLQMYRSKKLDESGQVLSQHRAMQERHQIYDMHERLDAQRHNGVGHKSYVPSSVAMKQPYDFKAHESSRFQQVGYLNNHMTRPSSMWGQDSWLFEAPNYRIFPQRNEKKTSSHLHVMDANSRNGPILGKNWPPKGTAGSQGYDKQEFIGSSWDDKYSELPSSWSIRASSVNNQHQRSSCATIFSSHVRLGAEVREIKEGMLQFTNEVQLSPQWQVKAQLERLKENKGSAGMLALKLSQHIGNVRETNGGTTESEQGINTMLSLSLFPSSPSMDQALCYYNN* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1996 417 MobiDBLite consensus disorder prediction 259 280 - -
Dod03g1996 417 SUPERFAMILY Homeodomain-like 88 144 IPR009057 -
Dod03g1996 417 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 31 403 IPR044848 GO:0003700
Dod03g1996 417 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 146 IPR017930 -
Dod03g1996 417 MobiDBLite consensus disorder prediction 50 77 - -
Dod03g1996 417 Gene3D - 89 146 - -
Dod03g1996 417 MobiDBLite consensus disorder prediction 12 84 - -
Dod03g1996 417 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 90 145 IPR006447 GO:0003677
Dod03g1996 417 MobiDBLite consensus disorder prediction 31 48 - -
Dod03g1996 417 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 31 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1996 Dod-Chr3 45645778 45650481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1996 81 151 G2-like Transcription Factor Family AT2G42660 71.831 7.99e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod03g1996 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1996 - - lang:109337615 362.459