Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1993 ATGACCTTAAGGAAACATAGCCAATGCAAATCGATGAATGTAGTGATGGCTAGCTATAGGGTATTTGTTCTATGCTTTCTCCTATTCTCCTTCTCTCCCATAGTCAAATGCCTGAGAAGCATCACTCCAGACAAATCCATTCATTACGGCGAGACCCTGGTTTCTGCAGCTGGAACTTTTGAAGCAGGATTCTACGGCTTGGGTAATTCACAGAGCCTATACTTTTGCATATGGTACATGGGTATATCACCTAGGACAATTGTGTGGGTAGCCAACAGAGATGCACCGGTGGATAACTCCACAGCAATTTTCAAAGTCACTGATGGGGGGAATCCAGTTATACTTGACGGCTCAGGGAACACAATTTGGTCCTCCAATGCATCCACAGCTGCAAAGGAGCCTGTTCTATTGCTCTTGGACACAGGAAACCTTGTTGTAAGAAATGGAGGTGGCAGTGGGAACATTGTATGGCAGAGTTTTGATTACCCTGGTGACACTTGGCTACCAGGGATGATACTTCATGTCAGTAGAGTTAGTGGTGTGCATAATTCTCTGACTTCTTGGAAGGATACAGGAGATCCTGGAAGTGGTGATTTTTCATACCATCTAGATGGTCATGGCTTTCCTCAACTATTTATTACGAAGAGATCAACATTAATATACAGGCCGGGTCCATGGAATGGTTTTTTCTTCAGTGGTATTCCTTGGGAAACACTCTATAGTTACTTTGAATTCTCTTTTGTGATAACTGACAAGGAAGTTCATTATAAATATGAACCCAGGAACGATTCTATTGTTTCTAGATACATGATAAATCCAACAGGTACTGTGCAACGCTTCATGTTGTCATCTGATAGAAAAACTTGGCAACTTTTCCTAGCTGGGCCTGAGGATAGGTGTGATAATTATGCCTTGTGCGGTGCAAACTCTAACTGCAATGCTAATAACTCTCCGCAATGTGTATGCCTCACAGGTTTCACACCAAAGTCTCCTGGGAATTGGAATGATGGGTGTGTTAGGAAGGCAAATTTGGATTGTAATGATAAAGATGGCTTTCTGAAGTATACAGGAATAAAGTTGCCAGATACTTCTTCCTCCTGGTTTGATGAGAAGATGGACATCCAGGAATGTGAGAAACAATGCTTGAAAAACTGCAGTTGCTCAGCATATGCAACTTTGGATATTAGAAATGGTGGAAGTGGATGCATCATTTGGTTTAATAATCTCATGGACATGAGGGCACGAAGTGAAGGGCAAGAAATTTACGTAAGAGTGGCTGCTTCAGAATTAGGTAATTCAAAGAATAAAGAGAGCAAGAAAAAGCTTGCAGGAATTTTCGTAGGAATCGGGATATTCATATTGGCAATCATAATAATTGGATATGTCATCTATCAAAGGAGGAAGAAACAAGGGAAGTCAGGTAAGGACGCAATGATTGACAAGGAGGACCGCATTGAGAAATTTGACAAGGAGAACATTGACTTACCAACATTTGATTTTTCAACCATAGCTAATGCAACTGATCACTTTTCCCTTGGTAACATATTAGGAGAAGGTGGATATGGACCAGTTTACAAGGGCACGCTAGCAAATGGCAGAGAGATTGCAGTAAAGCGGCTTTCCGGGAAATCAGGACAAGGACCACAGGAATTCAAAAACGAGGTTATGTTGATTGCCAAACTTCAACATCGAAATCTCGTGAAACTTCTTGGTTGTTGCATTGAGAACGATGAACGAATCCTAATCTATGAATACATGCCTAATAGAAGTTTGGACAAATTTATTTTTGATCAAACCAGAAGCAAAGTGTTGGATTGGAATAAACGTTTACATATTATAAGTGGGGTTGCTCGAGGACTTCTGTATCTTCATCAAGATTCTAGGCTAAGAATCATCCATAGAGATCTAAAAGCCAGTAATATTCTTCTTGATAATGATATGAACCCAAAAGTATCAGATTTTGGACTAGCCAGGGCTCTTCGTGGGGATCATGCGGAGGCGGCCAATACATTAAGAATAGTGGGAACTCATGGTTACATGCCTCCTGAATATGCAGTATATGGATCTTTTTCAGTGAAGTCTGATGTCTTTAGCTTTGGTGTTATTGTACTAGAGATGGTTAGTGGGAGGAAGATCAGAGAGTTTTTTGACCCAGAACATCATCTTAACCTTCTTGGACATGCATGGAGGCTGTGGACTGAGGATAGACTATTAGAGCTGATGGATGGCTCCTTAAGTGATTCAATTATTCTGTCTGAAGTATTAAGGTGCATTCACATAGGGCTATTGTGTGTGCAAGGAAGGCCAGATGATAGGCCAGACATGTCATCTGTTGTTCTAATGTTGAATGGTGAAAGAGCATTGCCTAAGCCAAGACACCCCGGGTTTTATCCACATGAAGTCGTCTCTTCAACAGGCAAGCATGAACTGTCTTCAACAAATGAAATTTCCATTTCGTTGTTAGAGGCAAGATAG 2475 0.4109 MTLRKHSQCKSMNVVMASYRVFVLCFLLFSFSPIVKCLRSITPDKSIHYGETLVSAAGTFEAGFYGLGNSQSLYFCIWYMGISPRTIVWVANRDAPVDNSTAIFKVTDGGNPVILDGSGNTIWSSNASTAAKEPVLLLLDTGNLVVRNGGGSGNIVWQSFDYPGDTWLPGMILHVSRVSGVHNSLTSWKDTGDPGSGDFSYHLDGHGFPQLFITKRSTLIYRPGPWNGFFFSGIPWETLYSYFEFSFVITDKEVHYKYEPRNDSIVSRYMINPTGTVQRFMLSSDRKTWQLFLAGPEDRCDNYALCGANSNCNANNSPQCVCLTGFTPKSPGNWNDGCVRKANLDCNDKDGFLKYTGIKLPDTSSSWFDEKMDIQECEKQCLKNCSCSAYATLDIRNGGSGCIIWFNNLMDMRARSEGQEIYVRVAASELGNSKNKESKKKLAGIFVGIGIFILAIIIIGYVIYQRRKKQGKSGKDAMIDKEDRIEKFDKENIDLPTFDFSTIANATDHFSLGNILGEGGYGPVYKGTLANGREIAVKRLSGKSGQGPQEFKNEVMLIAKLQHRNLVKLLGCCIENDERILIYEYMPNRSLDKFIFDQTRSKVLDWNKRLHIISGVARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKVSDFGLARALRGDHAEAANTLRIVGTHGYMPPEYAVYGSFSVKSDVFSFGVIVLEMVSGRKIREFFDPEHHLNLLGHAWRLWTEDRLLELMDGSLSDSIILSEVLRCIHIGLLCVQGRPDDRPDMSSVVLMLNGERALPKPRHPGFYPHEVVSSTGKHELSSTNEISISLLEAR* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1993 824 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 29 824 - -
Dod03g1993 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Dod03g1993 824 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 824 - -
Dod03g1993 824 Gene3D Hepatocyte Growth Factor 342 427 - -
Dod03g1993 824 Gene3D - 35 160 IPR036426 -
Dod03g1993 824 Gene3D Transferase(Phosphotransferase) domain 1 586 790 - -
Dod03g1993 824 CDD PAN_AP_plant 343 426 - -
Dod03g1993 824 Pfam D-mannose binding lectin 86 189 IPR001480 -
Dod03g1993 824 SMART blect_4 44 163 IPR001480 -
Dod03g1993 824 CDD STKc_IRAK 516 784 - -
Dod03g1993 824 PIRSF SRK 10 824 IPR024171 GO:0004674
Dod03g1993 824 SMART ntp_6 347 425 IPR003609 -
Dod03g1993 824 Gene3D Phosphorylase Kinase; domain 1 484 585 - -
Dod03g1993 824 SMART serkin_6 510 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1993 824 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Dod03g1993 824 CDD B_lectin 50 163 IPR001480 -
Dod03g1993 824 Pfam PAN-like domain 346 412 IPR003609 -
Dod03g1993 824 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Dod03g1993 824 ProSiteProfiles Bulb-type lectin domain profile. 38 159 IPR001480 -
Dod03g1993 824 Pfam Protein tyrosine and serine/threonine kinase 511 723 IPR001245 GO:0004672|GO:0006468
Dod03g1993 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 227 IPR036426 -
Dod03g1993 824 SUPERFAMILY Protein kinase-like (PK-like) 493 803 IPR011009 -
Dod03g1993 824 ProSiteProfiles Protein kinase domain profile. 510 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1993 Dod-Chr3 45382097 45385902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1993 427 799 Receptor kinase-like Gene Family AT4G23190 50.394 6.60e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g1993 PK_Tyr_Ser-Thr 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1993 - - ccaj:109805721 1007.67