Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1989 ATGGCCTCCATACCCTTGGGGCCGAACAACCAACTTCCGCAGCCGCAGCCGCTGCCGCTGCCGCTGCCACCGCCGCTGCAGGCAGTGGCTTCTCAACCGCCACAGCCTCCGCTGCAACCGGAATTAGCTCGCCGGAGCTCCGACATGGAGAAAGAGAGCAAGGAAGCGAAAAAAGAAGTTAGTGCCTATGGCCACATAATCTCCACCACAATTGGAGGCAAAAATGGTGAACCTAAACGGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAGTTGTTTTCCAGGCAAAATGCTTGGAGACAGGGGAGGCAGTGGCTATAAAGAAGGTTTTGCAGGACAGACGGTACAAAAATCGTGAGCTACAACTAATGCGTGAGATGGATCACCCTAATGTAGTTTCTTTGAAGCACCATTTCTTCTCCTCAACTGGCAGAGATGAATTATTTCTGAACTTGGTAATGGAGTATGTCCCTGAGACGTTGTATGAAGTTATAAAACGCTACAATACCATGAAGCAGAGAATGCCCCTTATCTATGTGAAACTATATACATATCAAATCTTTAGGGGACTAGCATATCTCCATACCGTGCCAGGAGTTTGCCATAGGGATTTGAAGCCTCAAAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGTTTTGTGATTTCGGGAGTGCAAAAGTCCTGGTCAAGGGTGAATCAAACATTTCGTACATATGTTCACGGTACTATCGGGCTCCTGAACTAATATTTGGTGCAGTGGAGTACACAACTTCTGTTGATATCTGGTCGGCTGGTTGTGTCCTTGCTGAACTTCTTCTAGGCCAGCCCTTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATTATTAAGGTTCTTGGTACTCCGACTCGAGAAGAAATTCGTTGCATGAACCCTAATTATACAGATTTTAGATTTCCTCATGTTAAAGCTCATCCTTGGCACAAGATTTTCCAAAAGCGAATGCCTCCTGAAGCAATTGACCTGGCATCGAGGCTTCTCCAATATTCACCAAACTTACGCTGCAATGCGCTGGATGCATGTGCACATCCTTTCTTTGATGAGCTTCGGGAGCCTAATGTCCAGCTACCTAATGGACGTCCACTGCCCCAGCTTTTCAACTTTAAGCAGGAATTAGCTGGAGCGCCACCTGAACTGATCAATAAGCTCATTCCGGAGCATATTAGGCGGCAAACTGTTCATGACTTCGCCCAACCGGCTAGTACATAG 1275 0.4659 MASIPLGPNNQLPQPQPLPLPLPPPLQAVASQPPQPPLQPELARRSSDMEKESKEAKKEVSAYGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMREMDHPNVVSLKHHFFSSTGRDELFLNLVMEYVPETLYEVIKRYNTMKQRMPLIYVKLYTYQIFRGLAYLHTVPGVCHRDLKPQNLLVHPLTHQVKFCDFGSAKVLVKGESNISYICSRYYRAPELIFGAVEYTTSVDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPHVKAHPWHKIFQKRMPPEAIDLASRLLQYSPNLRCNALDACAHPFFDELREPNVQLPNGRPLPQLFNFKQELAGAPPELINKLIPEHIRRQTVHDFAQPAST* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1989 424 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 43 417 - -
Dod03g1989 424 Gene3D Phosphorylase Kinase; domain 1 69 163 - -
Dod03g1989 424 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA-LIKE 43 417 - -
Dod03g1989 424 SUPERFAMILY Protein kinase-like (PK-like) 83 392 IPR011009 -
Dod03g1989 424 Pfam Protein kinase domain 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1989 424 MobiDBLite consensus disorder prediction 1 60 - -
Dod03g1989 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Dod03g1989 424 Gene3D Transferase(Phosphotransferase) domain 1 164 411 - -
Dod03g1989 424 MobiDBLite consensus disorder prediction 44 60 - -
Dod03g1989 424 MobiDBLite consensus disorder prediction 10 40 - -
Dod03g1989 424 SMART serkin_6 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1989 424 ProSiteProfiles Protein kinase domain profile. 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1989 424 CDD STKc_GSK3 79 371 IPR039192 -
Dod03g1989 424 ProSitePatterns Protein kinases ATP-binding region signature. 90 114 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1989 Dod-Chr3 45251004 45256079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1989 90 371 Core Cell Cycle Gene Families AT3G48750 36.082 3.27e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dod03g1989 Pkinase 1.1e-62 CL0016