Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1980 ATGTTTTGCAAGGGCATCCAAGGCAGCTCTTCACGTCAGATGACATGCAAATATGATGTGTTTGTAAGCTTCAGAGGTGACACACGCAACAATTTCACCGATCATCTCTTCGGTGCTCTCCGAAGGAAAGGCATTCAAGCCTTTAGGGATGACACAAAACTCAAGAAAGGAGAATCCATATCAAATGAGCTCCTACAAGCAATTGAAGGGTCTCAGGTGCGAAAACAAAATGGAAATTATGAGAAAGCCTTTGTAAAGCATGAACAAAGATTCAGAGAAGATTTGGAGATGATGGTGCAAGTGCAAAAATGGAGGGAAGCTTTGACTCAAGTGGCCAATCTCTCTGGTTGGGATATAAGGGACAGGCCACAAAATGCAGAGATTGAAAAAATTGTTGGGCACATAATCATCATATTGGGTCACATGTCTTCAAATTTTTCAAATGATTTAGTTGGGATTCAGTCTCCTATACAACAGTTAGAACATCATTTACGTTTGGGCTCAAATAATTATGTTCGAATGGTAGGAATTTGTGGGATGGATGGAATAGGAAAATCAACTATCGCTGCTACATTGTTTGACAGAATCTCTCATCTATATGATGCTTGTTGTTTTATTCATGATGTGAGCAAGATTTATCAAGTTGATGGCTTGATTGGTGTACAAAAGCAACTTCTTTGTCAAATTCTAAATGAAGAAAACCCCCTAATAGACAATCTTTCTAAGGCAAGTCATTTGATAAGAAGTAGACTATGTCACTTAAGGGTCCTTGTAGTTCTTGACAATGTTTATCAAGTTGAACAACTAGAGAAATTAGGTTTAAATCGTGAATGGTTGGCTATTGGGAGTAGAATCATCATAATTTCTAGAGATGAACATATCTTAAAAGAGTATGGAGTTGACAGAATTTATAGAGTTCCACTCATGAATGAGGAAAATGCCATTCAATTATTTTGTAGAAAAGCTTTCAAATATAGTGATATCATGATAGGTTATGAAAAGTTAACAAATGGCATACTAGAATATGCAAAAGGCCTTCCGTTAGCAATTAAAGTATTAGGCTCATTTTTGTTTGGCCGAGATGAATCCGAGTGGGCAAGTGCATTGGAAAGAGTAAGAGAAAGTCCAAGGAGTGATATTATGGATGTGCTTCGAATTAGCTTTGATGGACTAGAGGATGTGGAAAAGAAAATATTTCTAGATCTTGCTTGTTTCTCTTACAATCAGCATGAGGCATATGTGAAGAAAATTCTAGATTATTGTGGATTCCATTTAGATATTGGAATAAGAGTTCTCACTGACAAGTCACTCATTAGTATTAATAAGGATATGGAAATTTATATGCATGATTTGTTGCGAGAGTTGGGTAAGAGTATTATTCGAGAAAAATCTCCCAACGAGCCGGGAAAGTGGAGTAGATTGTGGCGCCACATGGATTTCCACAAGGTCATGTTGGAAAAGACGGCAACAGAGTATATTGAAGCAATAGTTCTACCACATCATTCATCGGAGGATAATCCACACAATATGACATTAAAGGCAGATGCTCTATCACAAATAAGGCACCTTAGATTGCTCATGCTTTGGAATGTGAATATTTCTGGAAGCCTCAATTTTCTTTCTAATGAATTATGTTACCTTGAGTGGGATAGATTTCCTTTAACATATTTGCCATCAAGTTTCCAACCTCATAAATTAGTTGAATTGATTCTACCTCATAGTAGTATTAAACAACTATGGAAAGGCATGAAGCCTATACACAATTTGAGATATTTGGATCTTCGACATTCTAAGAACCTTATGATGGTGCCAGATTTTCAAGTGGTTCCAAACCTTGAGTCACTAAATCTTACAGGATGTATAAAACTTGTGAACATGCAATGCTCTATCCCCTTACATCGAATTAATGTTGTTATTCCAGGAAGTAAAATTCCTAGGTGGTTCAACAAACAGAATGTGGGTAGTTCAATAAGCCTCGCTTTATCTTCCATCATGAATGACAATAATTGGATTGACATTACTTACTGTGCAACATTTGTGGCACATGATGATCTAACTTATTTGGATGAAAGATGGAAAGGGCAGATTATGTGTGATGAATATGAGTGGACAAGTGCATTGGCAGGACTTAGAGAAAGTCCAAGGAGTCACATCATGGATGTGCTTCGAATTAGCTTTAATGGACTAGAAGATATGGAAAAGGAAATATGTCTAGATCTTGCTTGTTTTTCTTACATGAAATATACCGACATTTTGATCTTCCCTCTTGCTCACCAGAGTCCTTATCCCGTGGCAACTACCAGCAGCGCTCTTAAGCTCAGATGTGCTTTGTTGGCTCCCCGTCTTGTGCTATCATCGGTGGTCTTCAGTAGTTCCGTGTCTTACGTTGTTCTTCTCAGATTGTGGTATATGGAGGTGGAAAGGTCTATGGAGGAGGAATCAAACAACCATGACATTGAGAATATTGTTAAGCCAGCTGTTGAAATGGAGTTTGATTCAATAGAAGCAATTAAAACATTTAACAAGAAGTATTCAACTGAAATAGGTTTTGGATGGCAGATTATGTAG 2568 0.3738 MFCKGIQGSSSRQMTCKYDVFVSFRGDTRNNFTDHLFGALRRKGIQAFRDDTKLKKGESISNELLQAIEGSQVRKQNGNYEKAFVKHEQRFREDLEMMVQVQKWREALTQVANLSGWDIRDRPQNAEIEKIVGHIIIILGHMSSNFSNDLVGIQSPIQQLEHHLRLGSNNYVRMVGICGMDGIGKSTIAATLFDRISHLYDACCFIHDVSKIYQVDGLIGVQKQLLCQILNEENPLIDNLSKASHLIRSRLCHLRVLVVLDNVYQVEQLEKLGLNREWLAIGSRIIIISRDEHILKEYGVDRIYRVPLMNEENAIQLFCRKAFKYSDIMIGYEKLTNGILEYAKGLPLAIKVLGSFLFGRDESEWASALERVRESPRSDIMDVLRISFDGLEDVEKKIFLDLACFSYNQHEAYVKKILDYCGFHLDIGIRVLTDKSLISINKDMEIYMHDLLRELGKSIIREKSPNEPGKWSRLWRHMDFHKVMLEKTATEYIEAIVLPHHSSEDNPHNMTLKADALSQIRHLRLLMLWNVNISGSLNFLSNELCYLEWDRFPLTYLPSSFQPHKLVELILPHSSIKQLWKGMKPIHNLRYLDLRHSKNLMMVPDFQVVPNLESLNLTGCIKLVNMQCSIPLHRINVVIPGSKIPRWFNKQNVGSSISLALSSIMNDNNWIDITYCATFVAHDDLTYLDERWKGQIMCDEYEWTSALAGLRESPRSHIMDVLRISFNGLEDMEKEICLDLACFSYMKYTDILIFPLAHQSPYPVATTSSALKLRCALLAPRLVLSSVVFSSSVSYVVLLRLWYMEVERSMEEESNNHDIENIVKPAVEMEFDSIEAIKTFNKKYSTEIGFGWQIM* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1980 855 Gene3D - 308 392 IPR042197 -
Dod03g1980 855 Gene3D Ribonuclease Inhibitor 485 680 IPR032675 -
Dod03g1980 855 Gene3D - 72 142 IPR035897 -
Dod03g1980 855 Gene3D - 10 71 IPR035897 -
Dod03g1980 855 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 402 IPR027417 -
Dod03g1980 855 Pfam Leucine Rich Repeat 565 582 IPR011713 -
Dod03g1980 855 ProSiteProfiles TIR domain profile. 16 139 IPR000157 GO:0007165
Dod03g1980 855 Pfam NB-ARC domain 156 376 IPR002182 GO:0043531
Dod03g1980 855 PRINTS Disease resistance protein signature 584 600 - -
Dod03g1980 855 PRINTS Disease resistance protein signature 343 357 - -
Dod03g1980 855 PRINTS Disease resistance protein signature 174 189 - -
Dod03g1980 855 PRINTS Disease resistance protein signature 250 264 - -
Dod03g1980 855 Pfam C-JID domain 639 706 IPR045344 -
Dod03g1980 855 SUPERFAMILY L domain-like 461 638 - -
Dod03g1980 855 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 144 632 - -
Dod03g1980 855 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 702 753 - -
Dod03g1980 855 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 702 753 IPR044974 GO:0006952
Dod03g1980 855 Gene3D - 143 303 IPR027417 -
Dod03g1980 855 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 117 IPR035897 -
Dod03g1980 855 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 144 632 IPR044974 GO:0006952
Dod03g1980 855 Pfam TIR domain 17 72 IPR000157 GO:0007165
Dod03g1980 855 SMART till_3 17 114 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1980 Dod-Chr3 44983819 45021385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1980 172 638 WRKY Transcription Factor Family AT5G45050 33.676 4.25e-69 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1980 - - mtr:MTR_4g080777 760.37