Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1974 ATGGCTATACTTCCGGCTTTGCTTGTCATTTCCAAGCTCTTATCATTCCTCACTCAAATTTCTTGTACAACTGATACAATTGCCCAGTCCCAGTCACTTCACGATGGCAGCACCTTGATTTCAAAGGATGGAACCTTTGAGTTGGGTTTCTTCAGTCCAGGTAGTTCTACAAACCGCTATGTAGGAATCTGGTACAAAAACATCCCAGTTAAAACTGTTGTATGGGTTGCTAACCGTGACAACCCCGCCAAAGACAATTCCAGCAAGCTAATGATAAGTAAAGAGGGAAACCTCGTCCTTCTCAGCCAGAATCAAACCCTTCTTTGGTCAACAAACACAACGACCAAGACTTCTTTGAGTCCTATTGTGCAGCTTTTAGACACTGGGAATTTAGTAGTCAGAGATGGAAATAGTGACAATAACAATGAAGAGAATTTCCAGTGGCAGAGCTTCGACCACCCTTCTGGTACAATGTTGCCAGGGATGAAGCTTGGATGGAACCTCAAGACAGGCCTTAACCGGCGCTTTACTTCTTGGAAGAGTTGGGATGACCCTTCTACTGGAGACTTTACTTGGGGGATTGACCCTACTTGCAACCCAGAAATGGTGATGTGGAAGGGCTCGGTTGAGTCCTATAGGAGTGGCCCTTGGAATGGCATCAGATTCAGTGGTTCACCTACAATGAGAGAAAATCCAGTTTATGACTACGATTTTGTCAACAATACAAATGAGCTTTATTTCACATACAACCTCAAGAATAAGTCTGTGATTTCAATAATTGTTATGAACCAAACCCTTTATCTTCGTCAACGGTTCACATGGATTCCAGGGAACAAGACATGGAGGATTTACCATTCTATACCAAGAGACAACTGCGATGCTTATAACCTCTGTGGCCCAAATGGAAATTGCGTTGATGGTCAGTCGCCTATTTGCCAGTGTTTGGAAGGATTCAAGCCAAAATCATCCCAAAGTTGGGAAGCAATGGACTGGTCACAGGGTTGTGTGCGCAGAGAAGCATGGAGTTGTGGCGTCAAAGACAAAGATGGTTTTCGCAGATTCACTGGCTTGAAATTACCAGATACAACACAATCTTGGGTCAATGAAAGCATGACACTTGAGGATTGCAAGGCCAAATGCTTGGGAAATTGTTCATGTGCAGCTTATTCAAATCTAGATGTTAGAGGAGAAGGTAGTGGCTGCGCCATCTGGTTCGGTGATCTTGTTAATTTGAGAATTATGGAAAGTGGACAAGACATATATATTCGAATGGCTGTTCCAGAGATAGCTACTAATGGAGATGTAAAACATGGACATAAGAAGGTTGCCTTGGTAATTACAATCCCATTTGCATGTGTCCTTGTGCTGCTACTCGCGATCTTCTACATTTACAAGACCAAAAGAAAATACATGGAGCAAACAGATCAAACTTTGTCAACGGAAAAGAAACATGAGGAAGGACAAGAAGATTTGGAGCTTCCCTTCTTTGATCTTGCTACTGTAATTAATGCCACCAATGACTTCTCAATTGACAATAAGTTGGGCGAAGGTGGTTTTGGACCGGTATATAAGGGTATATTGGAAGATGACCAAGAGGTTGCTGTCAAAAGACTTGCAAGAGCTTCTCAACAAGGATTACAAGAATTTAAGAATGAAGTAATATTGTGTGCGAAATTACAACATCGAAATCTTGTCAAGGTTATTGGCTGTTGCATTGAAGGAGAGGAGAAAATGCTAGTATATGAATACATGCCTAACAAAAGTCTAGATTCTTTTCTTTTCGATTCTGCTCAAAATAAACGCATAGATTGGCCTAAACGGCTCCACATTATAAATGGAATTGCTCGAGGACTTCTTTATCTTCATCATGATTCTAGACTAAGGATTATTCACAGAGATCTTAAAGCAAGCAACATTTTACTGGATAAAGAGATGAATCCAAAAATTTCAGATTTTGGCTTAGCTAGAATGTGTGGAGGAGATCAAATTGAAGGGAAAACAAGTAGAATAGTTGGAACATACGGTTACATGTCACCTGAATATGCTATTGATGGGCTATTCTCTATAAAATCAGATATCTTTAGTTTCGGCATACTATTGCTAGAGATTGTGAGCGGCATGAAAAACAAAGGAACGTTTTCCTTTCCAAGCCAAAGTTATAATCTTATTGGCCATGCATGGAGGTTGTGGAAGGAGAACATCCTAGTGAAATTAATTGATACTTGTTTGGGGGACACACTCAACTTATATGAAGCCTGTCGTTGTATTCATATTGGTCTTTTATGTGTTCAACAACAACCAGATGATAGGCCAAACATGGCATCTGTGGTTGTGCTGTTGAATAGTAAGAGCACTCTACCTCAACCTAAAGAGCCTGCTTTCTTAATAGAAAAGGTCACAATGGAAGGAGAATCTTCAAATCTCATGCAGGCATCTTCAACTAATGAAGTAACGATGTCAGTGTTGGAAGCTAGATAA 2478 0.4064 MAILPALLVISKLLSFLTQISCTTDTIAQSQSLHDGSTLISKDGTFELGFFSPGSSTNRYVGIWYKNIPVKTVVWVANRDNPAKDNSSKLMISKEGNLVLLSQNQTLLWSTNTTTKTSLSPIVQLLDTGNLVVRDGNSDNNNEENFQWQSFDHPSGTMLPGMKLGWNLKTGLNRRFTSWKSWDDPSTGDFTWGIDPTCNPEMVMWKGSVESYRSGPWNGIRFSGSPTMRENPVYDYDFVNNTNELYFTYNLKNKSVISIIVMNQTLYLRQRFTWIPGNKTWRIYHSIPRDNCDAYNLCGPNGNCVDGQSPICQCLEGFKPKSSQSWEAMDWSQGCVRREAWSCGVKDKDGFRRFTGLKLPDTTQSWVNESMTLEDCKAKCLGNCSCAAYSNLDVRGEGSGCAIWFGDLVNLRIMESGQDIYIRMAVPEIATNGDVKHGHKKVALVITIPFACVLVLLLAIFYIYKTKRKYMEQTDQTLSTEKKHEEGQEDLELPFFDLATVINATNDFSIDNKLGEGGFGPVYKGILEDDQEVAVKRLARASQQGLQEFKNEVILCAKLQHRNLVKVIGCCIEGEEKMLVYEYMPNKSLDSFLFDSAQNKRIDWPKRLHIINGIARGLLYLHHDSRLRIIHRDLKASNILLDKEMNPKISDFGLARMCGGDQIEGKTSRIVGTYGYMSPEYAIDGLFSIKSDIFSFGILLLEIVSGMKNKGTFSFPSQSYNLIGHAWRLWKENILVKLIDTCLGDTLNLYEACRCIHIGLLCVQQQPDDRPNMASVVVLLNSKSTLPQPKEPAFLIEKVTMEGESSNLMQASSTNEVTMSVLEAR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1974 825 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Dod03g1974 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
Dod03g1974 825 SUPERFAMILY Protein kinase-like (PK-like) 491 788 IPR011009 -
Dod03g1974 825 Pfam Protein tyrosine and serine/threonine kinase 509 777 IPR001245 GO:0004672|GO:0006468
Dod03g1974 825 CDD PAN_AP_plant 342 425 - -
Dod03g1974 825 CDD B_lectin 30 154 IPR001480 -
Dod03g1974 825 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Dod03g1974 825 Gene3D Hepatocyte Growth Factor 342 425 - -
Dod03g1974 825 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 819 - -
Dod03g1974 825 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Dod03g1974 825 Pfam PAN-like domain 343 411 IPR003609 -
Dod03g1974 825 Gene3D Transferase(Phosphotransferase) domain 1 584 791 - -
Dod03g1974 825 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 819 - -
Dod03g1974 825 CDD STKc_IRAK 514 781 - -
Dod03g1974 825 Gene3D - 18 151 IPR036426 -
Dod03g1974 825 Pfam Domain of unknown function (DUF3403) 782 825 IPR021820 GO:0004674
Dod03g1974 825 ProSiteProfiles Protein kinase domain profile. 508 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1974 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Dod03g1974 825 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Dod03g1974 825 SMART ntp_6 346 424 IPR003609 -
Dod03g1974 825 Gene3D Phosphorylase Kinase; domain 1 466 583 - -
Dod03g1974 825 SMART blect_4 30 154 IPR001480 -
Dod03g1974 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Dod03g1974 825 SMART serkin_6 508 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1974 825 Pfam D-mannose binding lectin 72 180 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1974 Dod-Chr3 44589622 44593376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1974 431 807 Receptor kinase-like Gene Family AT4G23190 49.219 6.99e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g1974 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1974 - - gmx:100790436 1142.87