Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1972 ATGGCTACCTTCATTTTAAGGTCTAATGAAGTAGTTCATTCCTTGGGCTTGTTTTGTCTCCTGCTGTTAGTACATAAGTGTGCTGCCTCTGATTTCATTGTTGGGGGGCAAAAGGGTTGGAGTGTTCCAAGTGACTCCAATTTCAATCCATTCAATCAATGGGCAGAAAAGAACCGGTTTCAAATAGGAGACTCCCTAGTGTTCAACTACCAATCTGGCCAAGACTCAGTGCTTTATGTAAAAAGCGAGGACTACGGCAGCTGCAACACTGGCTCACCTTATGCAAAGTTCTCTGACGGGCACACAGTCTTCAAGCTCAACCAATCAGGGCCACACTTCTTCATAAGTGGAAACAAAGACAACTGCCTCAAAAATGAGAAGTTAGCAGTGACTTGTTCTGGCTGA 405 0.4444 MATFILRSNEVVHSLGLFCLLLLVHKCAASDFIVGGQKGWSVPSDSNFNPFNQWAEKNRFQIGDSLVFNYQSGQDSVLYVKSEDYGSCNTGSPYAKFSDGHTVFKLNQSGPHFFISGNKDNCLKNEKLAVTCSG* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1972 134 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 131 - -
Dod03g1972 134 CDD OsENODL1_like 31 130 IPR041846 -
Dod03g1972 134 Gene3D - 29 134 IPR008972 -
Dod03g1972 134 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Dod03g1972 134 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Dod03g1972 134 PANTHER BLUE COPPER PROTEIN 5 131 IPR039391 GO:0009055
Dod03g1972 134 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1972 Dod-Chr3 44465226 44466743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1972 15 130 Phytocyanin Superfamily AT3G20570 61.207 2.13e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1972 - - gmx:100781182 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1972 03 44465226 44466743 Dod03g1972 03 44465226 44466743 ECH