Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1959 ATGTCTATTCCCAAAGCTCCTGCAAAGAGATGGATGCATGGTTCTGTGGATTCTCTAATATCTCATCATGAGCACCACTATTCCAGAAGAAAGTCCAGCAACCCGACTCCAGGGCCAGCCTACCCGATCCAGCCTCCTAGATACAGCCATCAAGTGCCCTCTCCTTCACTTAGAATTTCACCTCTTGGTTTATCATTGAAGAAGATCAAGACTCCACCACCAGCATATGCTTTTGTTCTCCCACCTCCATCTCCAAATAAGGCTAATCAGCAACTAGAGAAAACCAATGTCCTCATAAACTTGGTACTAAAGGGAGTAAAATTTGATGACGTCACGGCATTTTCAATATATAAGAAATTCTGGAACAAGGAGGTTCTTACGCATGCATTGCAGTTTGGTGGTTACGAAGTACTCGATGTTCATTATCCAGGTTTTCCACCATCTCCGCCTTCAACTCCCTCAAGTGTTTCTGGTATAGATGATGGGCCATATCCTGGCCACGACAACAATGGAACAATGGTGAAACCTTTAGGAGATGTCTCAAGGAAGAAAATGGAAGGGAGCAGTGGAAGAATGACTATTATAATTGTCCTGTCATCAATTACTGCTTTTGTTCTATTCATTGGATTTGCATGGCTTTGTCTGTTGAAATACAGCTCCTGTGTTATTGAAAGTGAACATGTTCCAGATGCTTTAATTTCAACCTCTTCAAAACCATCTGGGGCTGCCTCGTCATTGACTCATGGGAACATGCCAAATTCTAGATCACTGTCCTTCAACTCTGGAACAATAACATACACGGGATCTGCTAAGATTTTTACTTTGAATGACTTAGAGAAAGCAACAAATAACTTTGATTCTTCAAGAGTATTAGGAGAAGGTGGCTTTGGACTTGTTTACAAAGGAGTTCTGAAAGATGGGAGGGATGTAGCAGTGAAGATTCCTAAAAGAGATGATCAGTGTGGTGGCCGTGAGTTCTTGGCGGAAGTTGAGATGCTTAGCCTCCTGCACCATAGAAATTTAGTTAAACTGATAGGCATATGCATAGAGAAAAGGACTCGCTGCCTAGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGCGCTGACAAGGAAACCAGTCCACTAGATTGGAATGCACCAATGAAGATTGCACTTGGTGCAGCCAGGGGATTAGCTTATCTTCATGAAGATTCAAATCCATGTGTCATACATCGGGACTTCAAGTCCAGCAACATCTTGTTGGAATATGATTTTACATCCAAAGTTTCAGATTTTGGATGGGCTAGAATGGCACTGGATGAGGGAACATGTAAGAACTGCTACTTGGCTCCTGAATATGCAATGACTTGCCATCTTCTTGTGCAAAGTGATGTTTACAGCTATGGAGTTGTACTCCTTGAGCTCCTAATTGGAAGAAAGCCGGTGGATTTTTCACAACCTCCAGGTCAAGAAAATCTTGTTACATGGGTTTGTCCACTTCTCACAAGTAAGGAGGGATTGGAGATGATCATGGACCCAGTTGTAAAGCCTAGCATTCCTGCTCACACCATGGTAAAAGTTGCTGCAATTGCATCCATGTGTGTGCAACTGGAAGTGTCTCAACGCCCCTTCATGGGCGAAGTCGTTCAAGCCGTGAAGCTGGTATGCAATGAATTCGAGGAAACAGGCCATGTCAGATCCAGGAGTTTTCATGAAGAGGGTCTTCTAACTGATGTGGAAGGGAAGTTTTCTAGAGTCTCAGATGAGGAAGTGGATTTTTCAGATTATAACAAACCCTTTTGTGGCTATCAATCTGGTGAAGAAAAGGTAGCATTGTCAGCAACAGATTTGCTCAGCACTTCATGCCAGGAATGA 1869 0.4307 MSIPKAPAKRWMHGSVDSLISHHEHHYSRRKSSNPTPGPAYPIQPPRYSHQVPSPSLRISPLGLSLKKIKTPPPAYAFVLPPPSPNKANQQLEKTNVLINLVLKGVKFDDVTAFSIYKKFWNKEVLTHALQFGGYEVLDVHYPGFPPSPPSTPSSVSGIDDGPYPGHDNNGTMVKPLGDVSRKKMEGSSGRMTIIIVLSSITAFVLFIGFAWLCLLKYSSCVIESEHVPDALISTSSKPSGAASSLTHGNMPNSRSLSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRVLGEGGFGLVYKGVLKDGRDVAVKIPKRDDQCGGREFLAEVEMLSLLHHRNLVKLIGICIEKRTRCLVYELVPNGSVESHLHGADKETSPLDWNAPMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEYDFTSKVSDFGWARMALDEGTCKNCYLAPEYAMTCHLLVQSDVYSYGVVLLELLIGRKPVDFSQPPGQENLVTWVCPLLTSKEGLEMIMDPVVKPSIPAHTMVKVAAIASMCVQLEVSQRPFMGEVVQAVKLVCNEFEETGHVRSRSFHEEGLLTDVEGKFSRVSDEEVDFSDYNKPFCGYQSGEEKVALSATDLLSTSCQE* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1959 622 MobiDBLite consensus disorder prediction 22 54 - -
Dod03g1959 622 SUPERFAMILY Protein kinase-like (PK-like) 269 548 IPR011009 -
Dod03g1959 622 PANTHER OS01G0750732 PROTEIN 86 620 - -
Dod03g1959 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Dod03g1959 622 Gene3D Transferase(Phosphotransferase) domain 1 361 570 - -
Dod03g1959 622 ProSitePatterns Protein kinases ATP-binding region signature. 291 313 IPR017441 GO:0005524
Dod03g1959 622 ProSiteProfiles Protein kinase domain profile. 285 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1959 622 Gene3D Phosphorylase Kinase; domain 1 258 360 - -
Dod03g1959 622 PANTHER OS01G0750732 PROTEIN 86 620 - -
Dod03g1959 622 Pfam Protein tyrosine and serine/threonine kinase 288 548 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1959 Dod-Chr3 44119512 44123822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1959 86 582 Receptor kinase-like Gene Family AT5G56890 59.180 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dod03g1959 PK_Tyr_Ser-Thr 9.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1959 - - gmx:100814040 797.734