Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1943 ATGCCTACAGTGTGGTTCTCTCTGAAGAGGTCTCTACATTGCAAATCAGAGCCATCTGATGTTCATGACCCAAAATCCAGGAACGAGTTGAGCACAATCTTGACCAAGAGAGCAGGGAGGTCAGGGTGTTCCAGGTCCATTGCAAATCTGAAAGATGTCATCCATGGAAGCAAGAGGCTTCTTGACAAGCCACCAAATTGCAGCCCAAGATCCATAGGGAGCAGTGAGTTCCTCAACCCCATTACCCATGAAGTGATTCTGAGCAACTCAAGGTGTGAGCTGAAAATCACTGGCTATGGAGGATTCCAAGAAGGGGTTGGCAGTGGCGGTGCTAACAATGCTGGTGGTGGTCGTGGTTGTTCAACCTTTGTGGGCACTTTGAGGCCTGGAACTCCTGGTCCTGGAGGGCACCCTACAATGCACTATTTTAACCCTTCTTTTGGGACTTCATCCACTCCTCCAAGGAAATGTCCTTTACTTCCATCAGATTATAAAGATGGATCTGGTGCTCGTGGTGGTGGACTTCAGTCAGGCAATAGGTTGTCTGTTGAGACAGATTCTAATGGCTCATCAACTGTGACTTGTCACAAATGTGGAGAACAATTTAACAAATGGGAAGCTGCTGAGACTCATCATCTGTCCAAGCATGCAGTTACTGAACTCGTGGAAGGCGATTCATCAAGAAAAATAGTGGAGATAATATGCAGGACGAGCTGGCTGAAGTCCGAAAACCACTGCAGTCGAATCGAGAGAGTTTTGAAAGTCCACAGCATGCAAAAGACACTGGCTAGATTTGAAGAGTACAGGGAGATGGTGAAGATCAAGGCCAGCAAACTCCAGAAGAAGCATCCTAGGTGCCTGGCTGATGGGAATGAGCTATTGAGGTTCTATGGCACCACTGTTGCCTGCTCCCTTGGTCTCAGTGGCTCTTCAAGTCTGTGCCTGTCTGAAAAATGCTGTGTTTGCAGAATCATCAGAAATGGTTTTTCAGCCAAGAATGAACTCAAGGGTGGCATTGGTGTTTTCACAACATCCACGAGTGGAAGAGCCTTTGAATCTATTGAGATTCTCGATGATGACCCTTCACTGTGGAAAGCACTGATAGTCTGCAGGGTAATTGCTGGCCGGGTTCATAGGCCTCTGGAGAACATTCAGGAAATGGCATCCCAAACTGGGTTTGATTCATTGGCTGGGAAAGTTGGTCTTTATTCAAATATTGAGGAACTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTAATTTGCAAGCCATGA 1284 0.4657 MPTVWFSLKRSLHCKSEPSDVHDPKSRNELSTILTKRAGRSGCSRSIANLKDVIHGSKRLLDKPPNCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGANNAGGGRGCSTFVGTLRPGTPGPGGHPTMHYFNPSFGTSSTPPRKCPLLPSDYKDGSGARGGGLQSGNRLSVETDSNGSSTVTCHKCGEQFNKWEAAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCSRIERVLKVHSMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLSGSSSLCLSEKCCVCRIIRNGFSAKNELKGGIGVFTTSTSGRAFESIEILDDDPSLWKALIVCRVIAGRVHRPLENIQEMASQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1943 427 PANTHER - 2 427 - -
Dod03g1943 427 SUPERFAMILY ADP-ribosylation 218 426 - -
Dod03g1943 427 ProSitePatterns Zinc finger C2H2 type domain signature. 195 216 IPR013087 -
Dod03g1943 427 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 427 - -
Dod03g1943 427 MobiDBLite consensus disorder prediction 131 187 - -
Dod03g1943 427 Gene3D - 208 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1943 Dod-Chr3 43355621 43358238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1943 1 427 C2H2 Transcription Factor Family AT5G54630 66.957 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod03g1943 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1943 - - gmx:100785097 732.25