Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1942 ATGGAATCACGGCACCTTTTCAGTTTCAGTGTGACTAGTTCAGGACTACGTGGCACATCATCTTATCCTGTTGTACCTCAATTACCCAACCAGCTGCTTGGATCCTTGAAAGTTGACTTAAGAAACTCCCATACTACTCACTTTGATTCTGATACTCGTTCTGCATTGAGTGATAGCCGGGAACAACACGGCTCTGGGGAAAACATCTCTGGTGCTAGCCCTTCTTGTAACTCTTTGCTGGAAACCAGTCATTATTTGTGCAGGCCAGTCTCATCTTTGGACCATCTGCAAGACAGTTTGCATTTACATTCTGCTAGGAGCTCTCTTCTACAGGATGCAAGTTGTGACCAAAAAACCAGACACGCATTGCTAGAACTAGAAACTGCTTTGATGGAAACTGATGGTCATGATGAAGTGACCGCGTCAAATGATTCTTTGGGTGATAGCAGAAGGCCAATGACATCTGGCCAAGGAAATAGTTCCCGGAGCCACGAGCGCCAGCGGTCAGAATATATTCAAAGTCAGCCTTCTTATGTTCTTAGAAGTAGGCTGTCAAGTGAAGTTGCACGTGCAGAGAAACGTCACAAATCAATGGGGGAAGCTTATCTACAAGGCTTCCCATCGAGCAATCTGAAACAATTGCTGATTGTATGTGCCAAAGCATTGTCCGAAAACAAAATGAAAGAATTTGATCAATTGACAGAAAAGGCTAGAAGAGCTGTGTCTATCAGTGGGGAGCCAATCCTGCGGCTTGGCGCCTATTTAGTAGAAGGGCTTGTTGCAAGGAAGGAATCATCTGGAAATAACATATATCGTGCCCTTAGGTGGAAAGAGCCAGCTGGTGAAGACTTACTCTCACACATGCAGATGCTATATGAAATCTGGCCATACTTTAAGTTCGGTTACATGGCTGCCAATGGCGCTATTGCTGAAGCATGCAGAAATGAGGATCATATTCACATCGTAGACTTTCAAATTGTACAAGGAACTCAATGGGTGACTCTCCTTCAAGCTCTTGCAGCAAGGCCTGGTGGGGCTCCACATGTGCGGATCACAGGGATTGATGATCCTGTTTCTAGATATGCTCGTGGTGATGGAATAGAGGCAGTTGGTAAAAGGTTGGCCATAATATCCGAGAAATTTGGCATCCCGGTTGAGTTTCATGGAGTGCCTGTCTTTGCCCCAGATGTGACTAGAGATATGCTTGATGTCAGGCCTGGAGAGGCATTGGCTGTGAACTTTCCTCTTCAACTCCATCGTACTGCTGATGAGAGTGTTGATGTGAGTAACCCAAGGGATGGACTTCTGAGATTGGTAAAGTCACTTTCTCCCAAGGTAACCACATTGATCGAGCAGGAATCAAACACGAATACAACTCCTTTCTTCAACAGGTTTGTAGAAACAATGGATTTCTACTTGGCCATATTTGAGTCCATTGATGTTACTCTCCCAAGAAAGAGCAGGGACCGGGTTAATGTGGAGCAACATTGTCTGGCGAAGGATATTGTGAACATTATTGCATGTGAAGGGAAGGAAAGGGTGGAGCGACACGAACTGTTTGGCAAGTGGAGGTCTAGGATGACAATGGCTGGTTTCCGTCAATACCCTTTGAGCCCTTATGTGAATTCGGTTATAAGAAGCCTTCTGAGGTGCTATTCAGAGCATTGTAGTGTTGTGGAGAAGGATGGAGCCATGTTGCTGGGCTGGAAGAACAGAAACTTGATATCAGCTTCAGCCTGGCATTGA 1746 0.4536 MESRHLFSFSVTSSGLRGTSSYPVVPQLPNQLLGSLKVDLRNSHTTHFDSDTRSALSDSREQHGSGENISGASPSCNSLLETSHYLCRPVSSLDHLQDSLHLHSARSSLLQDASCDQKTRHALLELETALMETDGHDEVTASNDSLGDSRRPMTSGQGNSSRSHERQRSEYIQSQPSYVLRSRLSSEVARAEKRHKSMGEAYLQGFPSSNLKQLLIVCAKALSENKMKEFDQLTEKARRAVSISGEPILRLGAYLVEGLVARKESSGNNIYRALRWKEPAGEDLLSHMQMLYEIWPYFKFGYMAANGAIAEACRNEDHIHIVDFQIVQGTQWVTLLQALAARPGGAPHVRITGIDDPVSRYARGDGIEAVGKRLAIISEKFGIPVEFHGVPVFAPDVTRDMLDVRPGEALAVNFPLQLHRTADESVDVSNPRDGLLRLVKSLSPKVTTLIEQESNTNTTPFFNRFVETMDFYLAIFESIDVTLPRKSRDRVNVEQHCLAKDIVNIIACEGKERVERHELFGKWRSRMTMAGFRQYPLSPYVNSVIRSLLRCYSEHCSVVEKDGAMLLGWKNRNLISASAWH* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1942 581 MobiDBLite consensus disorder prediction 134 172 - -
Dod03g1942 581 MobiDBLite consensus disorder prediction 1 24 - -
Dod03g1942 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 581 IPR005202 -
Dod03g1942 581 MobiDBLite consensus disorder prediction 145 162 - -
Dod03g1942 581 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 581 - -
Dod03g1942 581 Pfam GRAS domain family 211 580 IPR005202 -
Dod03g1942 581 ProSiteProfiles GRAS family profile. 202 581 IPR005202 -
Dod03g1942 581 MobiDBLite consensus disorder prediction 47 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1942 Dod-Chr3 43330221 43334025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1942 203 580 GRAS Transcription Factor Family AT5G48150 62.005 3.12e-167 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod03g1942 GRAS 6.3e-121 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1942 - - gmx:100775665 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1942 03 43330221 43334025 Dod03g1942 03 43330221 43334025 ECH
Dod10g1106 10 30396125 30397879 Dod03g1942 03 43330221 43334025 PCT