Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1927 ATGCCAAACCAGCGCTTCAGAGGTTTAGTTTCCAAAGATGGAGTATTTGAACTTGGCTTCTTCACAAAATCCAACAAAAGCTACCTTGGAATATTTTACAAGAATATCCAAGTTCAAAACGTTGTGTGGGTTGCAAACGGTAAGAACCCCATCATTTCCTCTGACCCCTCCAATGCCGCCTTAGAACTACACAGCACTGGCAATTTGGTCCTTACTCACCAGAACACTGTTGTTTGGCGCACATATTCCAAGAAAAAAGTGCAGAATCCAGTGGCAGAGCTCCAAGTTTCAGGAAATCTTGTGGTAAAAGAGGAGACTGCTGTAGCAAACCGAGATGCCTATTTGTGGCAAAGCTTTGACTACCCATGTAATACAATGATGGCAGGGATGAAGTTGGGATGGGACCTCCGAAGAAAGATGAATAGGTGTCTCACAGCCTGGAAGAGTGATGATGATCCAGCCCCAGGAGACTTATCTTGGTGTATTGAGCTACACAACTACCCTGACACTTACATGACGAAGGGAAAACAAAGGCTCTTCAGACTTGGACCATGGAATGGCCTGCGTTTCAGTGGCATGCCTGAACTGAAGCCTAATCCCATTTTCAATTTCAGTTTTGTCTCCAATAAGGATGAGGTTTATTACACATGGAACCTCAAAGATAATTCGCTCGTAACAACAGCAGTGCTTAACCAAACCAGTAATAGTCGTCCTCGCTATGTCTGGTCAGATACTGACAATTCATGGAGGAAATATTCAACGTTGCCCGGGGACTATTGTGATACTTATCGCCTATGTGGACCGAACGGATATTGTAGCATTTCTGAAGCACCTGTGTGTCAATGTTTAAAACGGTTCAAGCCTAATTCCACTGAAAAGTGGAACTCAATGGATTGGTCACAAGGATGTGTCCGGATACATCCAATAAGCTGCGAGCATAAGCTTACAGATGGGTTTGTCCTTATGGAAGGCTTGAAACTGCCAGATACTGAACGTACTTGGGGGAATGAGACCATTCGTTTAGATGAATGCAGAGTCAGGTGCTTGAGCAATTGTTCCTGCATGGCCTATACAAATTCGAATATAAGTGGAGCTGGTAGTGGCTGTGTCATGTGGTTTGGTGATCTAGTTGACATGAGACTATTTTCAGTTGGTGGCCAGGGCCTATATATCCGAATGCCTGCTTCAGAACTTGCCTTTTTTATTTTTTTTTGCCTTCATTTTTTAGGGAAGTCGGTGTTAGAAGATAACTATGAAAGATATGTAGATGATCTGGATCTTCCAATGCTTGATTTTTCCACAATTATGGCTACTACTAATAACTTCTCAGTGAAGAATAAGATTGGAGAAGGTGGTTTTGGACCTGTTTATTGGGGAAAATTAGAAGATGGGCAAGAAATTGCTGTGAAAAGACTTTCAAAGAGCTCAGGACAAGGAATGTATGAGTTCATAAATGAAGTAAAACTTATTGCAAAACTCCAACATCGAAATCTTGTCAAGCTTCTTGGTTGTTGCATTCAGAGACAAGAGAAAATGCTAGTTTATGAATACATGACCAATGGTAGCCTAGACTACTTCATTTTTGATTGTACCAAAGGTAAACTGCTAGATTGGCCAAAGCGCTTTCGCATAATATGTGGAATTTCTAGGGGACTTATGTATCTTCATCAAGATTCTCGATTAAGAATTGTGCATAGAGATCTCAAAGCAAGTAACATTTTACTTGATGATACCTTGAACCCAAAGATATCAGATTTTGGAATGGCCAAAATGTTTGGAGGAGAAGAGATTGAAGGAAACACCAATAGAATAGTTGGCACTTATGGGTACATGGCACCAGAGTATGCTATTGATGGGTTATTTTCTACAAAATCTGATGTCTATAGCTTTGATGTTTTATTGTTGGAGATCCTATATGGGAAGAGAAATAGAGGACGTTATGATGCAAAGAAATCACTTAACCTTGTTGGTCATGTATGGATGCTTTGGAAAATGGATAGGGCTTTGCAAATTATTGATTCCAACATAGAGGGTTCATACGTTGCATCTGAAATGTTACGCTTCATCCATGTTGCTTTATTATGCGTACAACAATTCCCAGAGGATAGACCTACAATGACCTTAGTGGTTCTAATGCTGGAAAGCGAGATGGAATTGGTTGATCCTAAAAGCCCAGGTTACTTTACAAAAAAGGAATCCATTGAAGCATATTCAAGCTCAAACAGTTTAGGTTCAAATAATGAAGTTACCATAACCTTATTAGGTGAGTCCCTGTTTTCCGCTCTTTCACTGTATATGACTCATCCACCACAACCACCACAGCCTGTCGTCGATGCTGAGTCTGATCCTTCAGAGGAGACATCTTCTGGTTCCTCCACTCCTTTAGGAGGTAGTGGGAAATGGGAGGGCTACCTAGCTGATGTGCCCAATGGACACTACTCTCCTCTTAGTTGA 2454 0.412 MPNQRFRGLVSKDGVFELGFFTKSNKSYLGIFYKNIQVQNVVWVANGKNPIISSDPSNAALELHSTGNLVLTHQNTVVWRTYSKKKVQNPVAELQVSGNLVVKEETAVANRDAYLWQSFDYPCNTMMAGMKLGWDLRRKMNRCLTAWKSDDDPAPGDLSWCIELHNYPDTYMTKGKQRLFRLGPWNGLRFSGMPELKPNPIFNFSFVSNKDEVYYTWNLKDNSLVTTAVLNQTSNSRPRYVWSDTDNSWRKYSTLPGDYCDTYRLCGPNGYCSISEAPVCQCLKRFKPNSTEKWNSMDWSQGCVRIHPISCEHKLTDGFVLMEGLKLPDTERTWGNETIRLDECRVRCLSNCSCMAYTNSNISGAGSGCVMWFGDLVDMRLFSVGGQGLYIRMPASELAFFIFFCLHFLGKSVLEDNYERYVDDLDLPMLDFSTIMATTNNFSVKNKIGEGGFGPVYWGKLEDGQEIAVKRLSKSSGQGMYEFINEVKLIAKLQHRNLVKLLGCCIQRQEKMLVYEYMTNGSLDYFIFDCTKGKLLDWPKRFRIICGISRGLMYLHQDSRLRIVHRDLKASNILLDDTLNPKISDFGMAKMFGGEEIEGNTNRIVGTYGYMAPEYAIDGLFSTKSDVYSFDVLLLEILYGKRNRGRYDAKKSLNLVGHVWMLWKMDRALQIIDSNIEGSYVASEMLRFIHVALLCVQQFPEDRPTMTLVVLMLESEMELVDPKSPGYFTKKESIEAYSSSNSLGSNNEVTITLLGESLFSALSLYMTHPPQPPQPVVDAESDPSEETSSGSSTPLGGSGKWEGYLADVPNGHYSPLS* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1927 817 SMART serkin_6 442 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1927 817 SMART blect_4 7 122 IPR001480 -
Dod03g1927 817 PIRSF SRK 2 401 IPR024171 GO:0004674
Dod03g1927 817 PIRSF SRK 409 757 IPR024171 GO:0004674
Dod03g1927 817 CDD PAN_AP_plant 307 394 - -
Dod03g1927 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 412 740 - -
Dod03g1927 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Dod03g1927 817 CDD STKc_IRAK 448 714 - -
Dod03g1927 817 Pfam D-mannose binding lectin 41 148 IPR001480 -
Dod03g1927 817 Gene3D Phosphorylase Kinase; domain 1 417 517 - -
Dod03g1927 817 CDD B_lectin 7 122 IPR001480 -
Dod03g1927 817 SMART ntp_6 314 393 IPR003609 -
Dod03g1927 817 Pfam Protein tyrosine and serine/threonine kinase 444 710 IPR001245 GO:0004672|GO:0006468
Dod03g1927 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 399 - -
Dod03g1927 817 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 11 399 - -
Dod03g1927 817 ProSiteProfiles PAN/Apple domain profile. 311 394 IPR003609 -
Dod03g1927 817 Gene3D - 4 119 IPR036426 -
Dod03g1927 817 SUPERFAMILY Protein kinase-like (PK-like) 428 727 IPR011009 -
Dod03g1927 817 MobiDBLite consensus disorder prediction 770 817 - -
Dod03g1927 817 ProSiteProfiles Bulb-type lectin domain profile. 1 115 IPR001480 -
Dod03g1927 817 ProSiteProfiles Protein kinase domain profile. 442 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1927 817 MobiDBLite consensus disorder prediction 781 796 - -
Dod03g1927 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 41 153 IPR036426 -
Dod03g1927 817 Pfam S-locus glycoprotein domain 180 289 IPR000858 GO:0048544
Dod03g1927 817 Gene3D Transferase(Phosphotransferase) domain 1 518 724 - -
Dod03g1927 817 Pfam PAN-like domain 313 379 IPR003609 -
Dod03g1927 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 412 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1927 Dod-Chr3 42446929 42472617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1927 419 738 Receptor kinase-like Gene Family AT4G23190 54.012 4.39e-118 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g1927 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1927 - - ahf:112733195 1033.48