Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1916 ATGGAAGTTCTTTCTTTAATAATCACCGTTGCATCAATATTCGTACCTGCTACTTTCAAAGTTTCCATAGCAATCGATACTATTCGTCTATCCCAGTCCATCAGTGATGGCATGACCTTGGTTTCCCAAGGTGGTAAGTTTGAACTTGGTTTCTTCAGTCCCATGAATTCCAATAAACGTTATGTGGGGATTTGGTACAAGAATATCTCAATTCAGACAGTAGTCTGGGTTGCAAATGGGGTCAATGCCATCAATGATTCTTCAGGTATCTTAACTGTGAACAGCACTGGCAACCTTGTCCTCAAACAGCATCAGGGCACTGTCGTCTGGTACACAAGCTCTACCAAACAAGCACAGAATCCAGTAGCACAGCTATTGGACTCGGGGAATCTTGTGCTAAGAGATGAAAGCGATGCAAACCCAGAAGCCTATTTGTGGCAAAGCTTTGACTACCCATCTGATACATCATTACCTGGGATGAAGTTGGGATGGAACCTTAGAATTGGTCTCGAATGGAGAATGACATCTTGGAAGAGTCCTGATGATCCATCCCCAGGAGACTTTTATTGGGGTATGTTGCTCCATAATTATCCTGAGCTCTATCTGATGAGGAGAACAGAAAAGTTTGTAAGAATAGGACCATGGAATGGCCTGCATTTTAGTGGCATACCAGATCAAAAGCCCAACCCAATTTATGATTTCAATTATGTATCCACTGAGGATGAGAAGTTCTACACGTACAGCCTCAAGACTGATTCTGTAATCTCTAGGTTGGTAATGAATCAAACCACTCTCATGTGTACTCGGTATGTGTGGGTGGAAGATGATCAAATTTGGAAGGTTTACAAATCACTCCCTAAAGACAACTGTGATTTTTATGGCATTTGTGGAGCCTATGGGAATTGCATGATTACAGGATCCCAAATCTGCCAATGTTTAACAGGTTTCAGTCCCAAGTCACCAGAGGCATGGAACTCATCTGACTGGTCTCATGGATGTGTCCGCAATAAACCACTAAACTGCACTAACAAACTAAAAGATGGATTCCTCAAAATTGAAGGTGTAAAAGTCCCAGAGACTACACATACTTGGGTGGATGGGACTATAGGTTTAGAAGAATGCAGTGTCAGGTGCTTGAATAATTGTTCTTGTATGGCCTACACTAATTTAGACATAAGAGGAGCAGGTAGTGGCTGCGTCATGTGGTTTGGTGATCTAATGGATATTAGACAGTTTCAAGATTCCGGACAAGATCTGTATATTCGAATGGATGCTTCCGAATTAGAGGAACTAGATGGGCACAAGAAAGAGCGGAGAATAATAGTGGCTACCACTATTGCTACAATTTCATTGATGCTTCTTCTTGGTCTTTATCGTATCTACACTGTCCGCAGGAGCACAACTGGTAACATTACTATGACCTATATCCAACATGGATGCTATTGTTCCATTTTATCAGACATTATAGAAATTATAGAAGGAGATCAAAACAGAGGAAGTAATGTGGAGGATATGGATCTACCATTGCTTGACCATTCATCAATAGTCACGGCTACTCATAACTTCTCAATAAAGAACAAGGTTGGCGAAGGTGGCTTTGGACCTGTATACAAGGGAAGATTAATAGGTGGACAAGAAATTGCAGTGAAGAGGCTTTCAAGGAGCTCTGGACAAGGAATGACGGAGTTCAAGAATGAAGTGAAGTTGATAGCAAAACTTCAACATAGAAATCTTGTTAAACTTCTTGGTTGTTGCATCCTAGGACATGAGAGAATGTTGGTTTACGAATACATGCCCAATCGTAGCTTGGATTGGTTGATTTTTGATGATGTGAAAAGTAAATTGCTAGATTGGCCTAAACGCTTTAACATTATTTGTGGAATTGCTCGAGGACTTCTTTATCTACATCAAGATTCTAGATTGAGGATAATTCATAGAGACCTCAAAGCAAGTAATGTTTTGCTTGATGACAAGTTGAACCCAAAAATATCAGACTTTGGCATTGCTAGAATTTTTGGAGGAGATCAAACCGAAGGAAATACAAACCGAGTGGTTGGAACTTATGGCTATATGGCACCAGAATATGCTGTTGATGGACTCTTTTCTGTGAAATCCGATGTTTTTAGTTTTGGTATCTTGTTGTTGGAGATTATATGTGGAAAGAGAAGCAGAGGTTTTTATCTTGAAGACGAATCTCCTAACCTTGTTACTCATGCTTGGTGTATGTGGAAAGAAGGCAAGGCTTTAGAACTGATTGACTCAAACATAGAGGGTTCTTGTGTTCTATTAGAAGTATTGCGTTGTATCCATGTAAGTCTCTTGTGCGTCCAGCAATACCCAGAAGATAGGCCTGTCATGCCTTCTGTGATTCTAATGTTGGGGAGTGAGATTGAACTGCCCGAGCCAAAAGAGCCTGGTTTCTATTTGAAGAAGGATTCATTTGCAGCAACTTCCAACTCAGCTCGAAGCCAAACGATCTCAAGCTCAACCAATGAGATGACTATCACCCAATTAGAAGCCCGATGA 2526 0.4082 MEVLSLIITVASIFVPATFKVSIAIDTIRLSQSISDGMTLVSQGGKFELGFFSPMNSNKRYVGIWYKNISIQTVVWVANGVNAINDSSGILTVNSTGNLVLKQHQGTVVWYTSSTKQAQNPVAQLLDSGNLVLRDESDANPEAYLWQSFDYPSDTSLPGMKLGWNLRIGLEWRMTSWKSPDDPSPGDFYWGMLLHNYPELYLMRRTEKFVRIGPWNGLHFSGIPDQKPNPIYDFNYVSTEDEKFYTYSLKTDSVISRLVMNQTTLMCTRYVWVEDDQIWKVYKSLPKDNCDFYGICGAYGNCMITGSQICQCLTGFSPKSPEAWNSSDWSHGCVRNKPLNCTNKLKDGFLKIEGVKVPETTHTWVDGTIGLEECSVRCLNNCSCMAYTNLDIRGAGSGCVMWFGDLMDIRQFQDSGQDLYIRMDASELEELDGHKKERRIIVATTIATISLMLLLGLYRIYTVRRSTTGNITMTYIQHGCYCSILSDIIEIIEGDQNRGSNVEDMDLPLLDHSSIVTATHNFSIKNKVGEGGFGPVYKGRLIGGQEIAVKRLSRSSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCILGHERMLVYEYMPNRSLDWLIFDDVKSKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGIARIFGGDQTEGNTNRVVGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEIICGKRSRGFYLEDESPNLVTHAWCMWKEGKALELIDSNIEGSCVLLEVLRCIHVSLLCVQQYPEDRPVMPSVILMLGSEIELPEPKEPGFYLKKDSFAATSNSARSQTISSSTNEMTITQLEAR* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1916 841 CDD B_lectin 31 152 IPR001480 -
Dod03g1916 841 Gene3D - 20 149 IPR036426 -
Dod03g1916 841 Pfam D-mannose binding lectin 73 178 IPR001480 -
Dod03g1916 841 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 32 840 - -
Dod03g1916 841 Pfam Domain of unknown function (DUF3403) 797 841 IPR021820 GO:0004674
Dod03g1916 841 SMART serkin_6 522 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1916 841 MobiDBLite consensus disorder prediction 820 841 - -
Dod03g1916 841 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Dod03g1916 841 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Dod03g1916 841 Pfam PAN-like domain 341 409 IPR003609 -
Dod03g1916 841 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Dod03g1916 841 Gene3D Transferase(Phosphotransferase) domain 1 598 801 - -
Dod03g1916 841 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Dod03g1916 841 SUPERFAMILY Protein kinase-like (PK-like) 507 793 IPR011009 -
Dod03g1916 841 CDD PAN_AP_plant 338 422 - -
Dod03g1916 841 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Dod03g1916 841 Pfam Protein tyrosine and serine/threonine kinase 523 786 IPR001245 GO:0004672|GO:0006468
Dod03g1916 841 SMART blect_4 31 152 IPR001480 -
Dod03g1916 841 PIRSF SRK 1 841 IPR024171 GO:0004674
Dod03g1916 841 Gene3D Phosphorylase Kinase; domain 1 489 597 - -
Dod03g1916 841 ProSiteProfiles Protein kinase domain profile. 522 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1916 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Dod03g1916 841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 840 - -
Dod03g1916 841 SMART ntp_6 344 423 IPR003609 -
Dod03g1916 841 CDD STKc_IRAK 528 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1916 Dod-Chr3 41436444 41440156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1916 510 807 Receptor kinase-like Gene Family AT4G23230 62.207 2.17e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g1916 PK_Tyr_Ser-Thr 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1916 - - gmx:100775648 1309.66