Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1913 ATGGCCATTCTTCCTATATTTGTGCTTGTTCTTTCCGAGCTTTTCTTCATTGATAAAACCACCTCTGCATCGGATACCATTACACAGTCTCAGTCACTTCCCGATGGTAAGACCTTGGTTTCAAACGATGGAAGCTTTGAGTTGGGTTTCTTTAGTCTTGGAAGCTCCACAAACCGCTACGTAGGAATATGGTACAAAAACATTCCGGTTAGAGCTGTTGTTTGGGTAGCCAACCGTGACAACCCAATCAGGGACAACACTAGTGTGTTGGCCATAACTACAGAGGGAAACCTCGTCCTTCTCAGCCATAACAACACCGTCCTTTGGTCAACCAACGCAACAACAAGGGTGTTAAGTCCGATAGCACGGCTCTTGGGTTCTGGTAACTTGGTTCTAAGAGATGAGAAAGACAATAATCCTCAGAACTACTTGTGGCAGAGCTTTGACTATCCCTCTGACACGTTCTTACCTGGAATGAAAGTGGGATGGGACTTTAAGACTGGCCTTAATAGACGCCTAACGGCTTGGAAAAACTGGGATGATCCATCCCTCGGGGACTTTACATGCGGAGTCGTACCTACCAACAACCCCGAAGTAGTGATGTGGAAGGGATCTAAAGAATTCTATAGAGGTGGCCCTTTCGATGGTGTTCAATTCAGCGGTTCACCATCTTTGAAGTTCAACCCAATTGTCAATTACACCTTTGTGTCGAACAAGGATGAATTGTACGTCTCATATATCCTCAATGATAAATCGGTGATTTCAAGGATTGTCATGAACCAAACAAGTTACGCACGTCAGCGCTTAACATGGAGCCAAGGTACTCAGACATGGAGGATGTCTTCAACTGTGCCAGGGGATTACTGTGACAACTACAATATCTGTGGCCCATATGGGATCTGTGTCCTTGGGGAGTCCCCAGTGTGTAGGTGTTTAAATGGGTTCAAGCCAAGATCGCGACAGAATTGGATTGAAATGGATTGGACTGAGGGATGCATGCACAGTGGAAATTGGAGCTGCAGGGAGAAGGATAAGGATGGTTTCCTCAAGTTTAGTAACGTAAAGGCGCCGGACACAAGAAGATCATGGCTTAATGCAAGTATGACACTTGAGGAATGCAAGGCCAGATGCTGGGAAAATTGTTCGTGTACGGCTTTTGCAAATTCAGACATCAGGGGACAAGGCAGCGGCTGCGCCATTTGGTTTGGTGATCTTTTGGATTTGAGACAGACTGAAAATGGTGGACAAGATCTCTACATCAGATTGGCAGTGTCAGAAACTGTTGGAAAGGATGGTTTAAAGAAGGCGATTGTGATCGCATGCACCGTTTCATCTATGATTGCGATGCTTATAATTCTTACTCTCATCTGTTGGAAAAGCAAAACAAAAATTAAAGAGGTCATCAAAAGGACGAAACATATACAAAAGAACAATGAAACAATACAAGAAGACTTTGAGCTGCCTTTGTTTGACTTTGCTTCAATAGCGCACGCCACAAATGACTTCTCAAGTGACAATAAGCTTGGTCAAGGTGGCTTTGGCCCTGTATACAAGGGAACACTACTAGATGGACAAGAGATTGCCGTTAAGAGACTTTCGCGGACATCAGGTCAAGGATTAAATGAGTTTAAGAATGAGGTTGAATTATGTGCCAAGCTTCAACATCGAAATCTTGTTAAAGTCCTAGGTTGTTGCATCCAAGAAGATGAGAAATTGCTCATATATGAGTTCATGGCCAACAAAAGCCTAGATTTCTTTCTTTTTGATTCTACACAAGGCAAACTTTTAGAGTGGTCTAGGCGCTTCAATATTATAAGTGGAATAGCTCGGGGATTACTTTATCTTCATCAAGATTCAAGATTAAGGATCATACATAGAGATCTTAAGGCGAGTAATATTTTATTAGACAACAAGATGAATCCAAAAATTTCAGATTTCGGTTTAGCTCGAATGTGTGGAGGTGATCAAATTGAAGGGAATACAAGTAGAGTAGTAGGCACATAG 2004 0.4276 MAILPIFVLVLSELFFIDKTTSASDTITQSQSLPDGKTLVSNDGSFELGFFSLGSSTNRYVGIWYKNIPVRAVVWVANRDNPIRDNTSVLAITTEGNLVLLSHNNTVLWSTNATTRVLSPIARLLGSGNLVLRDEKDNNPQNYLWQSFDYPSDTFLPGMKVGWDFKTGLNRRLTAWKNWDDPSLGDFTCGVVPTNNPEVVMWKGSKEFYRGGPFDGVQFSGSPSLKFNPIVNYTFVSNKDELYVSYILNDKSVISRIVMNQTSYARQRLTWSQGTQTWRMSSTVPGDYCDNYNICGPYGICVLGESPVCRCLNGFKPRSRQNWIEMDWTEGCMHSGNWSCREKDKDGFLKFSNVKAPDTRRSWLNASMTLEECKARCWENCSCTAFANSDIRGQGSGCAIWFGDLLDLRQTENGGQDLYIRLAVSETVGKDGLKKAIVIACTVSSMIAMLIILTLICWKSKTKIKEVIKRTKHIQKNNETIQEDFELPLFDFASIAHATNDFSSDNKLGQGGFGPVYKGTLLDGQEIAVKRLSRTSGQGLNEFKNEVELCAKLQHRNLVKVLGCCIQEDEKLLIYEFMANKSLDFFLFDSTQGKLLEWSRRFNIISGIARGLLYLHQDSRLRIIHRDLKASNILLDNKMNPKISDFGLARMCGGDQIEGNTSRVVGT* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1913 667 Pfam Protein tyrosine and serine/threonine kinase 505 652 IPR001245 GO:0004672|GO:0006468
Dod03g1913 667 Pfam PAN-like domain 340 408 IPR003609 -
Dod03g1913 667 Gene3D - 18 148 IPR036426 -
Dod03g1913 667 ProSiteProfiles Protein kinase domain profile. 502 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1913 667 Pfam D-mannose binding lectin 73 177 IPR001480 -
Dod03g1913 667 CDD PAN_AP_plant 339 423 - -
Dod03g1913 667 SMART serkin_6 502 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1913 667 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Dod03g1913 667 PANTHER - 23 667 - -
Dod03g1913 667 Gene3D Phosphorylase Kinase; domain 1 460 577 - -
Dod03g1913 667 SMART ntp_6 343 422 IPR003609 -
Dod03g1913 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Dod03g1913 667 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Dod03g1913 667 SMART blect_4 30 151 IPR001480 -
Dod03g1913 667 Gene3D Transferase(Phosphotransferase) domain 1 578 667 - -
Dod03g1913 667 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 667 - -
Dod03g1913 667 CDD B_lectin 30 151 IPR001480 -
Dod03g1913 667 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Dod03g1913 667 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Dod03g1913 667 CDD EGF_CA 287 319 - -
Dod03g1913 667 SUPERFAMILY Protein kinase-like (PK-like) 481 667 IPR011009 -
Dod03g1913 667 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1913 Dod-Chr3 41182853 41186244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1913 432 667 Receptor kinase-like Gene Family AT4G23190 54.393 8.62e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g1913 Pkinase 1.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1913 - - gsj:114378841 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1913 03 41182853 41186244 Dod03g1913 03 41182853 41186244 ECH