Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1908 ATGTTCCCATTCTGTACTAGGGTCAGTCTCTTCCACTCCATAATAGAAGGTTGCAGGTTCTCAGGTTTTCAGAGAAGTCATTCATGGAAGGAAAAAATGGTGGTAAACATTAGAGTGTTATTTCTTTCGGGCTTGTTTTTGTCATTCTTTAGGATCTCCACTTCACTAGATAGTTTAGCTCTGAACCAGTCTATACAAGATGGTAAGACTTTAGTTTCAGCAGGCGGAGCTTTTGAAGTGGGTTTCTTCAGCCCTCAAGACTCAACAAATCGTTATTTGGGTGTGTGGTACAGGAATTTATCCCCTTTAACTGTTGTGTGGGTGGCCAACAGGGAAACACCTCTCCAGAATAATTCAGGAGTCCTAAAACTCAATGAAAAAGGGGTTCTTGTTATTCTCAATGGCACAAATATCCCTGCTTGGTCATCCAACATATCAAGCAAGCTAGTGAATAATCCAATTGCTCAGATCTTGGATTCAGGAAATCTTGTGCTGAAAAATGTAGAGGATACGAAGGAGGATGACTTTTTGTGGCAGAGTTTTGATTATCCTTGTGATATATTTTTGCCAGCAATGAAGGTTGGATGGGACATCGTGTCTGGTTTAGATAGAATTATATCATCTTGGAAAAGTGCGGATGATCCAGCTAAGGGAGAGTATTCTTTGAAATTTGACCGTAGAGGATACCCACAACTACTTAGTTTGAAGGGATCTAGTATACAATTTAGATTAGGGTCGTGGAATGGCCTTGCTGTAACAGGATATCCAACACAACAATTGAAAGAACAACAAGGATATGAATTTGTTGTGAATGAAAAAGAAGTATATCATTCATATGAAGTCCTTGATAGCTCGATTGTCTCCATATATAAGCTTACCCCTTCAGGCCTTCTGCAGGCTTTAGCTTGGATAGGTAACACAGGCAGTCGGAAAGTTATCACAATAGGATGGCAAGACGCATGTGATGCTTTTGCCTTGTGTGGTGCATATTCTATATGCAAAATGGATGGTAATATTCCAAAGTGTGAATGCCTGAAAGGATATGTTCCTAAGTTTCCTGAACAATGGAATATATCTTATTGGTCTAACGGTTGTGTTCCAAAGAATAAATCTGATTGCAAAAGCCGCAACTCAGATGGATTCTGGAGGTACACAAACATGAAATTGCCGGACACGTCTTTGTCATGGTTTAATAAGACCATGAACCTTGACGAATGTCAGAAGTCATGTATGAAAAACTGTTCATGTACAGCATTTGCAAATTTGGATATTCGTAATGGAGGAAGTGGCTGTTTACTTTGGTTTAATAATCTGGTTGACATGAGGAAATTCAATAAATGGGGACAAGACCTTTATATTAGAATCCCTGCTTCAGAACTAGTTAATGGGCACAGAAACAAGAAGATGAAGCTGATAGCAATTACTGTTGGTGTGATTATTTTTGGATTAACTACATGTGTCTCCATAATGGTACTTAGAAAGAGAGTATTGGCAACAGTATACAATCTTGCGGCATTTCAGTGGCGGCAAGAATATTTTAGATTGAGCATGGAAGGCATGGATCTGCCAACATTTAATTTGTCGATCATTGCTAAAGCCACCAATGATTTTTCAAGTGGAAATAAATTGGGAGAAGGTGGATTTGGACCTGTTTACAAGGGTACACTGATAGATGGGCAAGAGGTGGCCATAAAAAGGCACTCGAAGTTGTCTGATCAAGGATTGGAGGAGTTTAAAAATGAAGTTGTGTTGATTGCTAAACTTCAGCACCGTAATCTTGTGAAGCTACTTGGATGTTGCATCGAAGGGGAGGAGAAAATGTTAATATATGAATACATGCCCAACAAGAGCTTGGACTATTTCATCTTTGATGAGACTAGAAGCAAGCTTCTGGATTGGGTTCAACGTTTCCACATTATTGGTGGCATTGCTCGGGGGCTTTTGTACCTTCACCAAGACTCTAGACTGAGAATTATCCATAGGGATTTGAAAGCTAGCAACATTCTACTAGATGCCCATATGAATCCAAAAGTTTCAGACTTTGGCCTAGCTCGGATTTTTGGTGGAGATCAATCACTAGCTAAAACAAAAAGAGTGATTGGCACATATGGTTACATGCCTCCGGAGTATGTGGTGTATGGTCATTACTCAATAAAATCAGATGTCTTTAGTTTTGGTGTAATAGTACTAGAGATAATAAGTGGAAAGAAGAACAGGGTATTTTCAGACCGAGAACACTGCCATAATCTTCTTGGATACGCATGGAGACTTTGGAATGAAGATAGGCCATTGGAAATGATAGATAAACACTTATGTGAAAGGTATATTCCTTATGAGGTCCTACGGTGCTTAAATTTGGGTTTGTTATGTGTACAACAAAAGCCAGAAGACAGGCCGGACATGTCCTCTGTGGTTCTTATGCTGAATGGTGAGAAATTATTACCCCAGCCAAAGGCGCCCGAATTTTATACTGGAAGCAGTTTACTTGAATTAGAATCTTCATCTAAAATACTCAATCTGCTATCCCCAAATGAGATGTCCCTTACCGTGTTTGAGGCAAGATAA 2565 0.3945 MFPFCTRVSLFHSIIEGCRFSGFQRSHSWKEKMVVNIRVLFLSGLFLSFFRISTSLDSLALNQSIQDGKTLVSAGGAFEVGFFSPQDSTNRYLGVWYRNLSPLTVVWVANRETPLQNNSGVLKLNEKGVLVILNGTNIPAWSSNISSKLVNNPIAQILDSGNLVLKNVEDTKEDDFLWQSFDYPCDIFLPAMKVGWDIVSGLDRIISSWKSADDPAKGEYSLKFDRRGYPQLLSLKGSSIQFRLGSWNGLAVTGYPTQQLKEQQGYEFVVNEKEVYHSYEVLDSSIVSIYKLTPSGLLQALAWIGNTGSRKVITIGWQDACDAFALCGAYSICKMDGNIPKCECLKGYVPKFPEQWNISYWSNGCVPKNKSDCKSRNSDGFWRYTNMKLPDTSLSWFNKTMNLDECQKSCMKNCSCTAFANLDIRNGGSGCLLWFNNLVDMRKFNKWGQDLYIRIPASELVNGHRNKKMKLIAITVGVIIFGLTTCVSIMVLRKRVLATVYNLAAFQWRQEYFRLSMEGMDLPTFNLSIIAKATNDFSSGNKLGEGGFGPVYKGTLIDGQEVAIKRHSKLSDQGLEEFKNEVVLIAKLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDYFIFDETRSKLLDWVQRFHIIGGIARGLLYLHQDSRLRIIHRDLKASNILLDAHMNPKVSDFGLARIFGGDQSLAKTKRVIGTYGYMPPEYVVYGHYSIKSDVFSFGVIVLEIISGKKNRVFSDREHCHNLLGYAWRLWNEDRPLEMIDKHLCERYIPYEVLRCLNLGLLCVQQKPEDRPDMSSVVLMLNGEKLLPQPKAPEFYTGSSLLELESSSKILNLLSPNEMSLTVFEAR* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1908 854 Pfam S-locus glycoprotein domain 242 352 IPR000858 GO:0048544
Dod03g1908 854 SMART serkin_6 537 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1908 854 Gene3D Phosphorylase Kinase; domain 1 501 612 - -
Dod03g1908 854 CDD B_lectin 62 184 IPR001480 -
Dod03g1908 854 ProSiteProfiles Protein kinase domain profile. 537 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1908 854 Pfam Domain of unknown function (DUF3403) 814 854 IPR021820 GO:0004674
Dod03g1908 854 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 46 852 - -
Dod03g1908 854 ProSiteProfiles Bulb-type lectin domain profile. 56 178 IPR001480 -
Dod03g1908 854 Gene3D Transferase(Phosphotransferase) domain 1 613 816 - -
Dod03g1908 854 Pfam Protein tyrosine and serine/threonine kinase 539 806 IPR001245 GO:0004672|GO:0006468
Dod03g1908 854 CDD STKc_IRAK 543 810 - -
Dod03g1908 854 PIRSF SRK 28 854 IPR024171 GO:0004674
Dod03g1908 854 SUPERFAMILY Protein kinase-like (PK-like) 515 808 IPR011009 -
Dod03g1908 854 Gene3D - 51 181 IPR036426 -
Dod03g1908 854 Pfam PAN-like domain 373 441 IPR003609 -
Dod03g1908 854 SUPERFAMILY alpha-D-mannose-specific plant lectins 105 215 IPR036426 -
Dod03g1908 854 Gene3D Hepatocyte Growth Factor 372 452 - -
Dod03g1908 854 SMART ntp_6 376 455 IPR003609 -
Dod03g1908 854 CDD PAN_AP_plant 370 456 - -
Dod03g1908 854 ProSiteProfiles PAN/Apple domain profile. 373 456 IPR003609 -
Dod03g1908 854 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 46 852 - -
Dod03g1908 854 SMART blect_4 62 184 IPR001480 -
Dod03g1908 854 Pfam D-mannose binding lectin 104 210 IPR001480 -
Dod03g1908 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1908 Dod-Chr3 41004197 41008428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1908 473 833 Receptor kinase-like Gene Family AT4G23190 52.419 1.68e-125 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g1908 PK_Tyr_Ser-Thr 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1908 - - aprc:113865090 1197.19