Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1901 ATGGACACGGAAGCGCTGAAAAAGATTAACAAGAACAAGAAACTTGTGAAGAAGCTTGCCAAGAAGTACCATGCTTTTCTGGCTTCTGAAGCTGTCATCAAGCAAATTCCTCGCCTTTTGGGACCTGGCTTGAACAAGGCAGGCGAGTAG 150 0.46 MDTEALKKINKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGE* 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1901 49 Pfam Ribosomal protein L1p/L10e family 2 48 IPR028364 -
Dod03g1901 49 Gene3D - 1 49 IPR016095 -
Dod03g1901 49 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 1 48 - -
Dod03g1901 49 PANTHER 60S RIBOSOMAL PROTEIN L10A-1-RELATED 1 48 - -
Dod03g1901 49 SUPERFAMILY Ribosomal protein L1 2 48 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1901 Dod-Chr3 40539461 40539610 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1901 1 48 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 91.667 2.36e-13 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1901 K02865 - fve:101309699 75.8701